Gene Information

Name : Deba_0491 (Deba_0491)
Accession : YP_003806458.1
Strain : Desulfarculus baarsii DSM 2075
Genome accession: NC_014365
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 563324 - 564022 bp
Length : 699 bp
Strand : -
Note : COGs: COG0689 RNase PH; InterProIPR001247:IPR015847:IPR020568:IPR002381:IPR 018336; KEGG: cko:CKO_05101 ribonuclease PH; PFAM: 3' exoribonuclease; exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: A8ARN1 ribonuclease PH;

DNA sequence :
TTGAGCAGAATCGACGGCAGAAATCCCGGCCAGATGCGGCCGGTGGTCATCAGCGGCGGGGTCAATCCCTATGCCGAGGG
CAGCGCCATCTGCGCCTTCGGCCAGACCAAAGTGCTCTGCACCGCCTCGGTGGAGCAAGGCGCGCCGCGCTTTCTCGAAG
GCGCGGGCCAGGGCTGGATCACCGCCGAATACGCCATGCTGCCCCGCGCGACCCACACCCGCACCGGCCGCGACCACGCC
CAGGCCGGCCGGGCCAAGGAGATCAGCCGGCTGGTCGGCCGGGCCCTACGCGCCGCCGCCGATCTGGCCGCCCTGGACGG
CTACACCATCCGCATCGATTGCGACGTGCTGGTGGCCGATGGCGGCACGCGCACGGCCGCCGTCAGCGGCGGCTGGGTGG
CCCTGGCCCTGGCCCTGCGCGGGCTGGGGCTGCAACCGCCGCGTCAGGTCATGGCCCTGAGCGCCGGGCGCGTCGACGGC
CGGTTGCTGGTCGATCTTTGCTACGCCGAGGATTCATCGGCCGAGTTGGACTTGAACATGGTCCTGGCCGCCGACGGCCA
GTTGATCGAGATCCAGGGCACGGGCGAACGCGGCGTGTTTTCGCCCGAGGAGCTCATGGAGCTGATCGCCATCAGCCGCC
AGGCGGCCGGCGATATCGTCGCGGCCCAACTGGCCGCCGTCAACGGGCCGGCCCGATGA

Protein sequence :
MSRIDGRNPGQMRPVVISGGVNPYAEGSAICAFGQTKVLCTASVEQGAPRFLEGAGQGWITAEYAMLPRATHTRTGRDHA
QAGRAKEISRLVGRALRAAADLAALDGYTIRIDCDVLVADGGTRTAAVSGGWVALALALRGLGLQPPRQVMALSAGRVDG
RLLVDLCYAEDSSAELDLNMVLAADGQLIEIQGTGERGVFSPEELMELIAISRQAAGDIVAAQLAAVNGPAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-31 50