|
Name : Deba_3159 (Deba_3159) Accession : YP_003809106.1 Strain : Desulfarculus baarsii DSM 2075 Genome accession: NC_014365 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 3499512 - 3499967 bp Length : 456 bp Strand : - Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR000037:IPR020081; KEGG: tfu:Tfu_2476 SsrA-binding protein; PFAM: SmpB protein; SPTR: Q47M13 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGGCCGGAACTGGCGTCAAAATCATCGCCGTCAACCGCAAGGCGCGGTTCAACTACGAACTGGGCGACCGCTTCGAGGC CGGCATGGTCCTCACCGGCACCGAGGTCAAATCGTTGCGCCTGGGCAAGGCCAGCCTGGTCGACGCCTACGCCAAGATCA AAAACGGCGAGCTGTGGTTGGTCAATTGCCAGATCCAGGCCTATCCCTTCGCCTACTACGACAACCACGAGCCCACCCGT CAGCGCAAGCTGCTCTTGCACAAGCGCGAGATCGCCAAGCTGGCCAGCAAGACCCAGGAGCAGGGCAACAGCCTGATCCC GCTGGCGTTATACTTCAAAAACGGCCGGGCCAAGGTAGAGCTTGCCCTGGCCAAGGGCAAGAAATTGCACGATAAACGCG CCTCGATCAAGGAGCGTGACCAGCAGCGCGAGATGGAGCGCGCCCTGCGCCGCTGA Protein sequence : MAGTGVKIIAVNRKARFNYELGDRFEAGMVLTGTEVKSLRLGKASLVDAYAKIKNGELWLVNCQIQAYPFAYYDNHEPTR QRKLLLHKREIAKLASKTQEQGNSLIPLALYFKNGRAKVELALAKGKKLHDKRASIKERDQQREMERALRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 4e-34 | 55 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-28 | 52 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 9e-25 | 43 |
