|
Name : Deba_2868 (Deba_2868) Accession : YP_003808815.1 Strain : Desulfarculus baarsii DSM 2075 Genome accession: NC_014365 Putative virulence/resistance : Unknown Product : Preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 3172568 - 3175087 bp Length : 2520 bp Strand : + Note : COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR011115:IPR011130:IPR001650:IPR011116:IPR 004027:IPR014018:IPR000185; KEGG: sfu:Sfum_1202 preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprot DNA sequence : ATGCTTGGAAAAATCGTCAAGTCAATCTTCGGCACCAAAAACGACCGCGAAATTAAGCGCCTAGGCCCCTTGCTGGAGGC CATCAACGCCTTCGAGCCCAAAATGCAGGCCCTGGGCGACGCCGAGCTGGCCGCCCTGACCCCGGCCTTTCGCCAGCGCC TGGACAACGGCCAAAGCCTGGACGACCTGCTGCCCGAGGCCTTCGCCGCCGTGCGCGAGGCCGGCCGCCGCACCCTGGGC CAGCGCCACTACGACGCCCAGATGATCGGTGGCATGGTCTTGCATCAGGGCAAGATCGCCGAGATGAAGACCGGCGAGGG CAAGACCCTGGCCGCCACCCTGCCGGTCTACCTCAACGCCCTGGCCGGCCGCGGCGTCCACGTGGTGACGGTCAACGACT ACCTGGCCCGCCGCGACGCCGAGTGGATGGGCGCCATCTACAACTTCCTGGGCCTGAGCGTGGGCTGCATCGTCCACGGT CTGGACGACGCCCAACGCAAGGATCAATACAACCGCGACATAACCTATGGCACCAACAACGAATTCGGCTTCGACTACCT GCGCGACAACATGAAGTTCACCGTCGAAGATCTGGTGCAGCGCGACTATTTCTTCGCCATCGTCGACGAGGTCGACTCCA TCCTCATCGACGAGGCCCGCACGCCGCTGATCATCAGCGGCCCCGGCGAAAAATCCAGCGAGCTTTACGTCCAGATCGAC CGGCTGATCCCCCGCCTCAAGCGCGAGGAGCACTACGCCGTCGACGAAAAGAGCCGCACCGCCGCCCTCACCGAGGACGG CGTGGCCAAGTGCGAGGAGTTGCTTCGGGTCGATAATCTCTACGATCCCCGTTATATAGACCTTTTGCACCACATCCAGC AGGCCCTCAAGGCCCACACGCTCTTCAAGCTCGACGTCGATTACATCGTCAAGGACGGCGAGGTGATCATCGTCGACGAG TTCACCGGCCGCCTCATGCCCGGCCGGCGCTTTTCCGAGGGCCTGCACCAGGCCCTGGAGGCCAAGGAAAACGTCAAGGT GGCCAGCGAAAACCAGACCCTGGCCACCATCACCTTCCAGAACTACTTCCGCATGTACGAAAAACTCTCGGGCATGACCG GCACCGCCGACACCGAAGCCGAGGAGTTTCGCAAAATCTACAACCTCGACGTGGTGGTCATCCCCACCCACCGGCCCATG GTCCGCAAGGACAACCCGGATCAGATCTATCGCACCGAGCGCGAGAAGTTCGACGCCGTCGTGCGCGAGATCAAAGACCT GCACGCCAAGGGCCGGCCCGTGCTGGTGGGCACCATCAACATCGACAAGTCCGAGCAGCTTTCCAAGATGCTCAAACGGC AAGGCGTGCCCCACCACGTGCTCAACGCCAAGCACCACGCCCAGGAAGCCGAGATCGTCGCCGCCGCCGGCCAGAAAAAC GCCGTGACCATCAGCACCAACATGGCCGGCCGCGGCACCGACATCGTCCTGGGCGAGGGCGTGCCCGAACTGGGCGGCCT GCACATCCTGGGCACCGAGCGCCACGAATCGCGGCGCATCGACAACCAGTTGCGCGGCCGCGCCGGCCGCCAGGGCGACC CCGGCTCCAGCCGCTTCTATGTCTCGCTGGAGGACGACCTGATGCGCCTTTTCGGCTCCGAGCGCATCAGCGGCATCATG ACCAAGCTGGGCATGGAGGAAGGCGAGCCCATCGAGCACAACTTGATCTCCAAGGCCATCGAAAACGCCCAGCGCAAGGT CGAGGGCCGCAACTTCGAGATCCGCGAGCAACTGCTCAAATACGACGACGTGCTCAACAAACAGCGCGAGGTCGTCTACG CCCAGCGCCGCCAGGCCCTCACCGGTGAGGGCGTCCACGAGGCCGTGGCCGAGATGATTGAAGAACAGGCCCACCAGTTG GCCGAAGCCCACGCCGACGAGAAAATCCCGCTGGAGCAGCGCGACGCCCAGGCCCTGGCCGAGGCCGTCTTCAACGTCTT CGGCTTCAAGCCCGAGCTGCCCGAACCGGCCCAATGGGACGCCCAGACCCTGGCCGAGGAGATCATCGCCCGGGCCAGGG CCGTCTATCAGCGCAAGTTCGACGAATACGGCGCGCCGATCATGCTTCAGGTCGAGCAGTGGGTGTTGCTGGACACCGTC GACGCCCACTGGAAAGACCATCTGCTCAACATGGATCACCTCAAGGAGGGCATCGGCCTGCGCGGCTACGCCCAGAAAGA CCCGCTGCGCGAGTATCAGCGCGAGGGCTTCGAGATGTTTTCGGCCATGGCCCAGAGCGTGCAGATGGAAACCGTGGCCA AGTTGATGCGCGTGCAGCTTTCGCGCCCCGAGGACGCGGTGCAATTGGCGCCCCAGGACGACACGCCGCTATCGTATTCC GGGCCCGACGCCGGCGCGCCGGAGCCCGTGCGGCGCAGCGCCAAAAAAGTCGGCCGCAACGACCCCTGCCCCTGCGGCAG CGGCAAGAAATACAAGAAATGCTGCGGGGCCAAAGGCTGA Protein sequence : MLGKIVKSIFGTKNDREIKRLGPLLEAINAFEPKMQALGDAELAALTPAFRQRLDNGQSLDDLLPEAFAAVREAGRRTLG QRHYDAQMIGGMVLHQGKIAEMKTGEGKTLAATLPVYLNALAGRGVHVVTVNDYLARRDAEWMGAIYNFLGLSVGCIVHG LDDAQRKDQYNRDITYGTNNEFGFDYLRDNMKFTVEDLVQRDYFFAIVDEVDSILIDEARTPLIISGPGEKSSELYVQID RLIPRLKREEHYAVDEKSRTAALTEDGVAKCEELLRVDNLYDPRYIDLLHHIQQALKAHTLFKLDVDYIVKDGEVIIVDE FTGRLMPGRRFSEGLHQALEAKENVKVASENQTLATITFQNYFRMYEKLSGMTGTADTEAEEFRKIYNLDVVVIPTHRPM VRKDNPDQIYRTEREKFDAVVREIKDLHAKGRPVLVGTINIDKSEQLSKMLKRQGVPHHVLNAKHHAQEAEIVAAAGQKN AVTISTNMAGRGTDIVLGEGVPELGGLHILGTERHESRRIDNQLRGRAGRQGDPGSSRFYVSLEDDLMRLFGSERISGIM TKLGMEEGEPIEHNLISKAIENAQRKVEGRNFEIREQLLKYDDVLNKQREVVYAQRRQALTGEGVHEAVAEMIEEQAHQL AEAHADEKIPLEQRDAQALAEAVFNVFGFKPELPEPAQWDAQTLAEEIIARARAVYQRKFDEYGAPIMLQVEQWVLLDTV DAHWKDHLLNMDHLKEGIGLRGYAQKDPLREYQREGFEMFSAMAQSVQMETVAKLMRVQLSRPEDAVQLAPQDDTPLSYS GPDAGAPEPVRRSAKKVGRNDPCPCGSGKKYKKCCGAKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 3e-126 | 41 |
