|
Name : Deba_2658 (Deba_2658) Accession : YP_003808606.1 Strain : Desulfarculus baarsii DSM 2075 Genome accession: NC_014365 Putative virulence/resistance : Unknown Product : DEAD/DEAH box helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 2949342 - 2951450 bp Length : 2109 bp Strand : - Note : COGs: COG1200 RecG-like helicase; InterProIPR014001:IPR001650:IPR016027:IPR004365:IPR 011545:IPR014021; KEGG: gbm:Gbem_1903 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; heli DNA sequence : GTGGTGGCCAAAAATACGCCGAGCGTGACGCCGTGGGCCTTGCCGGCCCTGGCCCGCTCGCTGGGCGCGTTGCCCGGCGT GGGGCCCAAGACGGTCCAGGCCCTGGCCGCGCGGGGCTTGCGCACCTGGGGTGATGGTCTGTTTTTTCTGCCGCCGCGCT ACGAGGACCGCCGCCGGGTCTGGCCGCTGGACGGCCTGGAAGAGGGCCGCTTGTGCGTGGCGCGCGGCCGGCTGACGAGC TCCGGGCCGTGGGGCCGGCGGGGCAAGGTCTGGCGCATGGTCCTCGACGACGGGGCCGGCCGCCTGAACCTGCTGTGGTT TCATTTCAAAAAAGCCCACCTGGAGGCCTTCGCCGTGGGGCGGGAGGTTTTTGCCGTGGGCCGTGCCGAGCTGGCCGAGG GCGGCTGGCGGATGGTTCACCCCGAGGTTTTCGACGAACAAAAGGCCGCCGAAGGCCGCGCGGTGGGCGTGATCCTGCCG GTCTATCCCGAGCTGGCCAGCCTGGGCCAGGGCGGCGTGCGGCGCTTCATGGCCGATCTGGCCGGCCGCACCGTCGATCT CATCCCCGATCCGCTCTTTGGCCTGCTGCCGGCCCGGCTCTACCCGTGTAGCGTGAGCCAGGCCCTGCGCCAGGCCCATC TGCCCGGCCCCGAGAGCGACCCGGCCGAACTGGACCCGCCAACCAGCGCCTGGCGACGGGTGCTGGCCGTCAACGAGCTT TTTTATTATCAACTGGGCCTGTGGCTCAAGCGCCGCCAGCGCCTGAGCCGGCCCGGCCTGGTCGTCGATCCACCCGGCGC GCTGGTCGAGCGCTTTCTGGCCGCGCTGCCCTTTGCCCTCACCGAGGGTCAGAACCAGGCCCTGGCGGCGATCCTGGCCG ACATGGCCAGCGGTCGGCCCATGGGGCGGCTGTTGGCCGGCGACGTGGGTTCGGGCAAGACCGTGGTGGCCCTGGCCGCC GCCGCGGCCGTGGCCGAGGCCGGGGCCCAGACCGCCCTGATGGCCCCGACGGAAGTGTTGGCCCGTCAGCACCTGGCCAG CGCCCAGGCCCTGCTGGAGCCCCTGGGCCTGAAGGCGGCCCTGGTGCTGGGCGGGGCCGACGCCCAGGGTCAAAAGCAGG CCCGCGCGGCGGCCCAAGGCGGGGCCGCGCTGCTGATCGGCACCCAGGCCATGCTCGCCGCCAGGCTGGAGTTCGAGCGC CTGGGCCTGGTGATCATCGACGAACAACAGCGCTTTGGCGTGCACCAGCGCCTGCGCCTGGCGGCAAAGGGCCTCGATCC CCACCTGCTGGTGCTCTCGGCCACGCCCATACCCCGCACCATGGCCCTGGCCCTGGCCGGCCACCTGGACATTTCGCCGC TGCCCCAACTGCCCGGCCGCCGGCCCAAGATCGCCACCACCGTGCTGGCCTTTGAACAACGCCGCCAGGCCGTGGAGGCC ATGGCCGCCACCCTCGCGGCCGGCGAGCAGGTCTATGTGATCTGCCCGCTGGTGGAGGCCTCCGACAAGATCCAGGCCCA TGACGCCGTGGAGACCCACCGCCGGCTTGGCGAATATTTTCCCGGCCAGGCCATCGGCTTGCTGCACGGCCGCCTGGATT CGGCCGCCCAGCAACGGGCCCTGGAAGATTTTCGCGCCGGCCAGACCAGGGCCCTGGTGGCCACCACCGTGGTGGAGGTG GGCCTGGACGTGCCGGCGGCCACGCTGATGATCGTCTTGGGGGCCGAGCGCTTTGGTCTGTGCCAGTTGCACCAGTTGCG CGGCCGGGTGGGCCGGGGCCAAAAGCCGGGGCGTTGCTGCCTGGTGACCGGCCCGGAACCGGGCGAGTTGGGTCGTCGCC GCCTGGAGGTGCTGGCCGCCACCGCCGATGGCCTGGCCGTGGCCGAGGCCGATTTGGCCATGCGCGGGCCGGGCCAGGCC CTGGGCGCGGGCCAAGCGGGCTTACCGCCGTTGCGTTTTGCCGGCGAGGTCGATCTGCTGCCCGAGGTGAGCCGGGCGGT GGATGGCCTTTTCGGTCAGGGCCGGCCCGACGACGAGCCCTTGGCCGCCCTGGTCGCCGAGGCCGTGCGCCGCTGGGGCC GGCTGATGGAGCTGGTGGAGGCCGGCTGA Protein sequence : MVAKNTPSVTPWALPALARSLGALPGVGPKTVQALAARGLRTWGDGLFFLPPRYEDRRRVWPLDGLEEGRLCVARGRLTS SGPWGRRGKVWRMVLDDGAGRLNLLWFHFKKAHLEAFAVGREVFAVGRAELAEGGWRMVHPEVFDEQKAAEGRAVGVILP VYPELASLGQGGVRRFMADLAGRTVDLIPDPLFGLLPARLYPCSVSQALRQAHLPGPESDPAELDPPTSAWRRVLAVNEL FYYQLGLWLKRRQRLSRPGLVVDPPGALVERFLAALPFALTEGQNQALAAILADMASGRPMGRLLAGDVGSGKTVVALAA AAAVAEAGAQTALMAPTEVLARQHLASAQALLEPLGLKAALVLGGADAQGQKQARAAAQGGAALLIGTQAMLAARLEFER LGLVIIDEQQRFGVHQRLRLAAKGLDPHLLVLSATPIPRTMALALAGHLDISPLPQLPGRRPKIATTVLAFEQRRQAVEA MAATLAAGEQVYVICPLVEASDKIQAHDAVETHRRLGEYFPGQAIGLLHGRLDSAAQQRALEDFRAGQTRALVATTVVEV GLDVPAATLMIVLGAERFGLCQLHQLRGRVGRGQKPGRCCLVTGPEPGELGRRRLEVLAATADGLAVAEADLAMRGPGQA LGAGQAGLPPLRFAGEVDLLPEVSRAVDGLFGQGRPDDEPLAALVAEAVRRWGRLMELVEAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 3e-70 | 42 |
