Gene Information

Name : Deba_0224 (Deba_0224)
Accession : YP_003806195.1
Strain : Desulfarculus baarsii DSM 2075
Genome accession: NC_014365
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 245632 - 247632 bp
Length : 2001 bp
Strand : -
Note : COGs: COG0021 Transketolase; InterProIPR005474:IPR005475:IPR005476:IPR009014:IPR 005478:IPR015941; KEGG: pna:Pnap_4499 transketolase; PFAM: transketolase; transketolase; SPTR: A6C7Q1 Transketolase; TIGRFAM: transketolase; PFAM: Transketolase, thiamine dip

DNA sequence :
ATGTTCAAGGTAGACAGCCAACTGGACCGTCAGGCCGTCAGCGCCATCAGCATGCTGGCCGCCGACATGGTCGAAAAGGC
CAACTCCGGCCACCCCGGCATGCCCATGGGCGCCGCGGCCATGGCCCACGTGCTCTGGAGCCGCTTTTTGCGCCACAATC
CGGCCGATCCCAGTTGGCCCAACCGCGATCGCTTCGTGCTTTCGGCCGGTCACGGCTCGGCGCTGCTCTACGCCCTGTTG
CACCTGCATGGCTATGATCTATCGCTGGACGAGCTGAAAAACTTCCGCCAGTGGGAGAGCAAGACCCCCGGTCACCCCGA
ATACGGCCAGACCCCCGGCGTGGAATGCACCACAGGCCCCCTGGGCATGGGCCTTTCCATGGGCGTGGGCATGGCCCTGG
CCGAGCGCTTCTTGGCCGGCCAGTTCAACCGGCCCGGCCACGCGGTGGTCGATCACCACGTCTACGCCATCGTCAGCGAC
GGCGATCTGATGGAAGGCGTGGCCTCCGAGGCGGCCTCGCTGGCCGGAACGCTGGGCCTGGGCAAGCTGGTTTATCTCTA
CGACGACAACCACATTTCCATCGAGGGCGGCACGGACCTGGCCTTCACCGAAGACGCCATGGCCCGGTTCGCGGCCTATG
GCTGGCACGTGCAGCGCGTGGCCGACGGCGCGGACCTGGAGGCCATCGCCCAGGCCATCCAGGCGGCCAAGGACGAGACC
GGCCGCCCCAGCATCATCGCCGTGCGCACCCACATCGGCCTGGGCAGCCCCAAGCAAGACCAGGCCAGCGCCCACGGCGA
GCCCCTGGGCCCCGAGGCCATGGCCGTCACGCGGCAAAAGCTGGGTTGGTCGGCCGAACCCTTCGCCGTCTCCGACCAGG
CGCGGGCCTATCTGGGCCAGTCCAAGGCCGCCGGTCAGGCCCTGCAAGCCCAGTGGCAAGAGGCCTTCCGGGCCTTTGCC
CAGGCCCAACCCGATCTGGCCGCCCAGTTCGAGGCCCAGATCGCCGGCCGCCTGCCCCTGGGCTTTGGCGGCGAGGTGCC
CACCCTGGGCCCGGCCGACGGCAAGATGGCCACCCGCGCCGCCAGCGGCAAGGTGCTAAACGCCCTGGCCAAACGCGTGC
CCAACCTGGTGGGTGGTTCGGCCGACCTGGCCCCCAGCACCAAGACGATCATCGCCGGCTCGGGCGACATGCGCCCCGGC
CAGCCGCCGGCCGGCCGTAATATTCACTTTGGCGTGCGCGAGCACGGCATGGCGGCCATCGTCAACGGCATGGCCCTGCA
CGGTGGGGTGATCCCCTACGGCGCGACGTTTTTCGTTTTCAGCGACTTTTGCCGGCCGGCCCTGCGCCTGGCCGCCCTGC
AAGGCTGCAAGAGCATCTTTGTCTTCACCCACGATAGCATCGGCGTGGGCGAGGACGGCCCGACCCACCAGCCGGTGGAG
CACTTGATGTCGTTGCGGGTCATGCCGGGCCTGCGCCTGATCCGCCCGGCCGACTACGGCGAGACGGTGGGGGCCTGGGC
CTGCGCGCTGCAAGGCGAGGGCCCCACGGTCATCGTGCTCACCCGCCAGGGTCTGCCCATCCTCGATCCGGCCCTGGGCG
CGGCCGAGGGCGTGGCCAGGGGCGCTTACGTGGTGGGCAATTGCGACGACGAGCCCCGGCTGATCCTCATCGGCACCGGC
TCCGAGCTGCACCTGTGCCTGGCCGCGCAAAAAGAGCTGGCCCAACGGGGCGTGGCCGCGCGGGTGGTTTCCATGCCCAG
TTGGGACATCTTCGCCGCCCAGGAAAAGGCCTACCGCGACCACGTGCTGCCGCCGACGGTGCGGGCCCGCCTGGCCGTGG
AGATGGGCGCGACCCTGGGCTGGGAGCGCTGGGTCGGCGACGGCGGCGCGGTGATCGGCCTGGACCGTTTCGGCGCTTCG
GCCCCGGGCGGGGTGTTGCAGGCCAAGTTTGGCTTCACGGTGGAAAACGTCGTGGCCAAGGCGCTGGAGCTGCTCAACTG
A

Protein sequence :
MFKVDSQLDRQAVSAISMLAADMVEKANSGHPGMPMGAAAMAHVLWSRFLRHNPADPSWPNRDRFVLSAGHGSALLYALL
HLHGYDLSLDELKNFRQWESKTPGHPEYGQTPGVECTTGPLGMGLSMGVGMALAERFLAGQFNRPGHAVVDHHVYAIVSD
GDLMEGVASEAASLAGTLGLGKLVYLYDDNHISIEGGTDLAFTEDAMARFAAYGWHVQRVADGADLEAIAQAIQAAKDET
GRPSIIAVRTHIGLGSPKQDQASAHGEPLGPEAMAVTRQKLGWSAEPFAVSDQARAYLGQSKAAGQALQAQWQEAFRAFA
QAQPDLAAQFEAQIAGRLPLGFGGEVPTLGPADGKMATRAASGKVLNALAKRVPNLVGGSADLAPSTKTIIAGSGDMRPG
QPPAGRNIHFGVREHGMAAIVNGMALHGGVIPYGATFFVFSDFCRPALRLAALQGCKSIFVFTHDSIGVGEDGPTHQPVE
HLMSLRVMPGLRLIRPADYGETVGAWACALQGEGPTVIVLTRQGLPILDPALGAAEGVARGAYVVGNCDDEPRLILIGTG
SELHLCLAAQKELAQRGVAARVVSMPSWDIFAAQEKAYRDHVLPPTVRARLAVEMGATLGWERWVGDGGAVIGLDRFGAS
APGGVLQAKFGFTVENVVAKALELLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 4e-138 51
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 7e-133 51