Gene Information

Name : Deba_2203 (Deba_2203)
Accession : YP_003808161.1
Strain : Desulfarculus baarsii DSM 2075
Genome accession: NC_014365
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 2445430 - 2446113 bp
Length : 684 bp
Strand : +
Note : COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: geo:Geob_1564 alanine racemase domain protein; PFAM: alanine racemase domain protein; SPTR: B9M5U1 Alanine racemase domain protein; PFAM: Alanine racemase, N-terminal domain;

DNA sequence : 
GTGAGCGTGGCCGCAAACCTGGCCTGGGTGCGCCAGCGCATGGACGCGGCCGCACGGCGGGCCGGGCGCGACCCGGCAAG
CGTGCGTCTGGTGGCCGTCTCCAAAACCAGGCCGCCCGATGATCTGCGCCAGGCCATGGCCGCCGGCCAGATGATTTTCG
GCGAAAACTACGTCCAGGAGTTGCAAGCCAAGGCCGCCGCCATGGGCGCGGGGCCGCGTTGGCACTTCATCGGCGCATTG
CAGAGCAACAAGGCCCGATTGGTGGCCCAACTGGCCGAGGTCGTCCACAGCGTGGACAGGCCCAAGCTGGCCGCGGCCCT
GGGCCGCCAAGCCCAGGAGTTGGGCAAGGAACTGGGCGTGCTGGTCCAGGTCAGCCTGGCTGGCGAGACCCAGAAAGCGG
GCTGCGCCGCCGCCGAGACCCCGGCGCTGTGCCAGATGATCGCCGCCACGCCGGGCCTGCGCCTGCTGGGGCTGATGACC
ATGCCGCCGTTTTTCGACGAGCCCGAGCGCGCCCGGCCCATCTTCGCCGAGCTGCGCCGCCTGGCCCGACGCCTGGCCGC
CGACCTGCCGCCCGGGGCCATGAATGAGCTTTCCATGGGCATGAGCGGCGATTTCGAAGTGGCTATCGAGGAAGGCGCGA
CCCTGGCGCGGGTGGGAACGGATATTTTTGGTCGACGCGGATAG

Protein sequence : 
MSVAANLAWVRQRMDAAARRAGRDPASVRLVAVSKTRPPDDLRQAMAAGQMIFGENYVQELQAKAAAMGAGPRWHFIGAL
QSNKARLVAQLAEVVHSVDRPKLAAALGRQAQELGKELGVLVQVSLAGETQKAGCAAAETPALCQMIAATPGLRLLGLMT
MPPFFDEPERARPIFAELRRLARRLAADLPPGAMNELSMGMSGDFEVAIEEGATLARVGTDIFGRRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-24 47
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-24 47
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-24 47
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-24 47