Gene Information

Name : Deba_1654 (Deba_1654)
Accession : YP_003807616.1
Strain : Desulfarculus baarsii DSM 2075
Genome accession: NC_014365
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 1833737 - 1835068 bp
Length : 1332 bp
Strand : -
Note : COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR003593:IPR011006:IPR009057:IPR 002078:IPR002197:IPR020441; KEGG: dba:Dbac_0628 two component, sigma54 specific, transcriptional re

DNA sequence : 
GTGAGTAAACTGGTGCTGATCGTCGATGACGAGGCGGGCTATCGCCAGCTTTACGCCCAGGCCCTGTCCAGGGCCGGCTA
CGAAACCATCGCCGCCGCCGATGGCCTCCAGGCCCTGCAAATGATCGAAGCCAAACGGCCGGAGCTGGTGCTCTGCGACG
TGCGCCTGCCCGGCCTGGACGGCCTGGAGCTATTGCGCCGCGGCCGCCGCGAGCGCCCGGACCTGCCATTTTTGCTGATA
ACCGCCCATGCCGAGGTGGGCCAGGCCGTGCGCGCCCTCAAGCTGGGCGCGGTGGATTACCTGGCCAAGCCGGTCGACAG
CGACCAACTCTTGGCCGCCGTGGCCGAGGTCGTCGGCCCGGCCGAGCAAACCGCCGACGACGACCTGCCGCCCCAGGCCC
TGCACGGCCTGGTGGCCCAGGCCCCGGCCTGGCGGGCGGCCCTGGCCCAGGCCCTGAAGGCCGCCGCCAGCACGGCCAGC
GTGCTGATCACCGGTGAAAGCGGCGCGGGCAAGGAGGTGCTGGCCCGCTTGATCCATCGCCACAGCCCGCGCGCCGCCAA
GCCCCTGGTGGCCGTCAACTGTGCGGCCATCCCGGCCGGCCTGCTGGCCAGCGAACTTTTCGGCCACGAACGCGGCTCTT
TCACCGGCGCATCGGCCCGGCGGCTGGGCCGCTTTCGCGAGGCCGACGGCGGCACGCTGTTTTTGGATGAAATCGGCGAC
ATGCCCCTGGAGTTGCAGCCGGCCCTGTTGCGGGCCATCGAGACCGGCCGGGTGACGCCGGTGGGCGGCGACCGCGAGCT
GGCCTCGGATTTTCGGCTGATCGCCGCCACCAACCACGACATCCAGGCCGAGGCGGCGGCGGGGCGTTTTCGGCAAGACC
TCTATTATCGGCTCAACGTGGTGGCCATCGAAGCGCCGCCCCTGCGCCAGCGGCCCGAGGACATCCTGCCCCTGGCGCGA
CGTTTTTTGGCCGGCGGCGACAAACGCCTTTCGCGGGCGGCGGCCCAAGCCCTGCAAGCCCACCACTGGCCCGGCAACGT
GCGCGAGTTGGCCAACGCCATGGAGCGAGCCGGCCTGCTCAGCCAGACCGACGTGATCCTGCCCGAGCACCTGCCCCCGG
CCGTGCGCCAGGGCGCGGCAAGCGCGTCGCCCGGCCCAGCGCCGCCGGCAACAGCCACGCCGCCGGCCGTCAAGACCTTG
GAGCAAAGCGAGGTGGAGGCCATCCGCCTGGCCTTGGCCCAGACCGGCGGCAACCGCACCAAGGCGGCCGATATCCTGGG
CATCACCCGGCGGGGGTTGATCTACAAACTAAAGCGCCTGGGCCTGGACTGA

Protein sequence : 
MSKLVLIVDDEAGYRQLYAQALSRAGYETIAAADGLQALQMIEAKRPELVLCDVRLPGLDGLELLRRGRRERPDLPFLLI
TAHAEVGQAVRALKLGAVDYLAKPVDSDQLLAAVAEVVGPAEQTADDDLPPQALHGLVAQAPAWRAALAQALKAAASTAS
VLITGESGAGKEVLARLIHRHSPRAAKPLVAVNCAAIPAGLLASELFGHERGSFTGASARRLGRFREADGGTLFLDEIGD
MPLELQPALLRAIETGRVTPVGGDRELASDFRLIAATNHDIQAEAAAGRFRQDLYYRLNVVAIEAPPLRQRPEDILPLAR
RFLAGGDKRLSRAAAQALQAHHWPGNVRELANAMERAGLLSQTDVILPEHLPPAVRQGAASASPGPAPPATATPPAVKTL
EQSEVEAIRLALAQTGGNRTKAADILGITRRGLIYKLKRLGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 3e-50 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 3e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deba_1654 YP_003807616.1 Fis family transcriptional regulator BAC0467 Protein 2e-64 46
Deba_1654 YP_003807616.1 Fis family transcriptional regulator BAC0089 Protein 3e-52 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deba_1654 YP_003807616.1 Fis family transcriptional regulator VFG1249 Protein 5e-55 46
Deba_1654 YP_003807616.1 Fis family transcriptional regulator VFG0116 Protein 6e-51 45
Deba_1654 YP_003807616.1 Fis family transcriptional regulator VFG1214 Protein 5e-54 44