Gene Information

Name : Deba_1644 (Deba_1644)
Accession : YP_003807606.1
Strain : Desulfarculus baarsii DSM 2075
Genome accession: NC_014365
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1822852 - 1823553 bp
Length : 702 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017911:IPR017871; KEGG: sfu:Sfum_2810 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: B9XKQ8 ABC transporter r

DNA sequence : 
GTGCAACTGATAGAATTGCGCGAAATTACAAAGACTTATAACCTAGGCGAAGTCCAGGTTCCGGTGCTCAAGGGCGTCTC
CCTGGGCGTGGCCCAGGGTGAGTTGGTGGCCTTGATGGGCGCTTCTGGCTCGGGCAAGAGCACGCTGATGAACATCATGG
GTTGTCTGGACCGGCCCAGCGCGGGCCAGTATCTGCTCGACGGCCGCGACGTGGCCGGCTTTTCGGCCGATCAGCGGGCC
AGGCTGCGCAACCGGAAAATCGGCTTCGTCTTCCAGAACTTCAGCCTGCTGCCGCGCACCAGCGCCCTGGAAAACGTCGC
CATGCCCCTGGCCTACGCCGCCGACCAGCCCGGCGACCGCCAGGCCCGCAAACGGGCCGCCGAGATGCTCGAACGCGTGG
GCCTGGCTCAACGCATGCACCACGAGCCCAATCAGCTCTCGGGCGGCCAACAGCAGCGGGTGGCCATCGCCCGGGCCCTG
ATCAATCGGCCCGAGCTGCTCCTGGCCGACGAGCCCACCGGCAACCTGGACTCCAAAACCAGCCAGGAAGTGCTGCAAAT
GTTTGCCAAACTCAACGAAGAAGACGGCATCACCATCATCCTGGTGACTCACGACGCCGAGGTGGCCCGTCACGCCAAGC
GCACCATCGCCATCAGCGACGGCGTCATCGTCGCCGACGGCGCGGAGGGCGAGGCGTCATGA

Protein sequence : 
MQLIELREITKTYNLGEVQVPVLKGVSLGVAQGELVALMGASGSGKSTLMNIMGCLDRPSAGQYLLDGRDVAGFSADQRA
RLRNRKIGFVFQNFSLLPRTSALENVAMPLAYAADQPGDRQARKRAAEMLERVGLAQRMHHEPNQLSGGQQQRVAIARAL
INRPELLLADEPTGNLDSKTSQEVLQMFAKLNEEDGITIILVTHDAEVARHAKRTIAISDGVIVADGAEGEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deba_1644 YP_003807606.1 ABC transporter NC_012469.1.7686878. Protein 3e-59 54
Deba_1644 YP_003807606.1 ABC transporter NC_008702.1.4606598. Protein 1e-47 52
Deba_1644 YP_003807606.1 ABC transporter CP001581.1.gene798.p Protein 2e-43 46
Deba_1644 YP_003807606.1 ABC transporter NC_012469.1.7686946. Protein 1e-30 42