Gene Information

Name : Spirs_0714 (Spirs_0714)
Accession : YP_003802443.1
Strain : Spirochaeta smaragdinae DSM 11293
Genome accession: NC_014364
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 742636 - 743328 bp
Length : 693 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: ank:AnaeK_4048 ABC transporter-related protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: ABC transporter; PFAM: AB

DNA sequence : 
ATGATCACACTCGACGCTATTACCAAAGGCTATCAGCGGGGCAGTTCAGAAGTGGCGGCTCTCAGAGGAATTTCGATCAA
GATCAAGAAGGGTGATTTTGTCGCCGTCGCCGGCCCCTCGGGATCGGGGAAGACCACCATGATGAATATCATCGGTCTTC
TCGACCGACCTTCCTCCGGACGGCTCATGATCGAAGGTGTCCCGATGGATGATCTTTCCCGCCGTGAGCGTACCCGATTC
CGGCGGGAGCATCTCGGCTTCATCTTTCAATCCTTCAACCTCATATCGGTCCTATCGGTTTTTGAAAATGTCGAATTGCC
TCTTATCATCGCCCGCTCTCCCCTTTCTTCTTCTCAGCGGCGGAAGAAGGTAAGCGAGGTAATTAGGAGGGTAGGGCTCG
ACGGCAGGGAGGACCATAAACCCGCAGAGCTCTCCGGCGGACAGCAGCAGCGGGTAGCCATTGCCAGGGCACTGGTGACG
GTTCCCACCCTCGTCATTGCCGATGAACCCACGGCAAACCTTGATTCGGCAACCGGGGAGAGGATCCTTTCGCTTATGAA
AGAGATCAACCGGAATAACGGTACCACCTTCCTCTTTTCCACCCACGATCCGGTGATCAGGGACATGGCCGATCATGTGA
TTCTTCTCCACGACGGCAATGTCGAACGAGAGATCCTTGGAAGCGAGCGATAG

Protein sequence : 
MITLDAITKGYQRGSSEVAALRGISIKIKKGDFVAVAGPSGSGKTTMMNIIGLLDRPSSGRLMIEGVPMDDLSRRERTRF
RREHLGFIFQSFNLISVLSVFENVELPLIIARSPLSSSQRRKKVSEVIRRVGLDGREDHKPAELSGGQQQRVAIARALVT
VPTLVIADEPTANLDSATGERILSLMKEINRNNGTTFLFSTHDPVIRDMADHVILLHDGNVEREILGSER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-30 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spirs_0714 YP_003802443.1 ABC transporter NC_012469.1.7686878. Protein 2e-43 45
Spirs_0714 YP_003802443.1 ABC transporter NC_008702.1.4606598. Protein 6e-38 44
Spirs_0714 YP_003802443.1 ABC transporter CP001581.1.gene798.p Protein 6e-36 43
Spirs_0714 YP_003802443.1 ABC transporter CP001581.1.gene598.p Protein 9e-36 41