Gene Information

Name : Spirs_4291 (Spirs_4291)
Accession : YP_003805958.1
Strain : Spirochaeta smaragdinae DSM 11293
Genome accession: NC_014364
Putative virulence/resistance : Unknown
Product : Integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4633731 - 4634567 bp
Length : 837 bp
Strand : -
Note : COGs: COG2801 transposase and inactivated derivatives; InterPro IPR001584; KEGG: maq:Maqu_0236 integrase catalytic subunit; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region; PFAM: Integrase core domain

DNA sequence : 
ATGATTGATCCTTCTGACCGTCATCTCTCTATTGCTCGGCAAAGCGAACTGCTTGGTGTAAGTCGTTCTCACCACTACTA
CAAAAAACGTGCCCCACAACGGGCTGATATAGAAGAAATGATCAAGCTGAAAGAGTTGTTTATAAAGTATCCGTTTTATG
GTTACCGTAAACAGATGCTTGAACTGGGCAATGAATCTATTGTCTCTACGGTAAAACGGGTCCGCCGTTTCATGAAAGAA
TTGGGCCTTAAAGCGCTGTCACCGAAGAAATTGACATCCATCCCGAAGAAGGAGCATCCGGTTTATCCATATCTGCTGAA
AGGAAAGAGGATCAGATATCCCAATCAGGTCTGGGCGACCGATATTACCTATCTGAAGCTTGAAACAGGATATGTTTATC
TGGTTGCCATTATGGATCTCTATAGCCGTAAAGTTTTAAGCTGGAGGATTTCACTCACTATGGATGCAGAGTTCTGCTGT
GAAGCGTTAAAGGACGCCCTGAGAAACTATGGCACGCCTGCGATCTTCAATACAGACCAGGGAAGTCAGTTTACCTCCTA
TGGCTTTCTTCAAATCCTGAAAGATGAAGGTGTAGAAATCAGTATGGATGGTCAGGGCCGTTGGCGGGATAATATCTATG
TTGAACGGTTCTGGCGAACTCTCAAGTATGAAGATATTTACTTGAAGTCCTATGAATCAGTGCGAGAACTGAAAACCGGA
CTTACCCGGTACTTCAGGTTCTACAACAGCCGAAGATTTCATCAGGGCCTGGATTATAGGACTCCGGAAGAGATGTATAT
ATCATTCCAGGAAAAGGAGCTTAAAGCTGCTGCATAG

Protein sequence : 
MIDPSDRHLSIARQSELLGVSRSHHYYKKRAPQRADIEEMIKLKELFIKYPFYGYRKQMLELGNESIVSTVKRVRRFMKE
LGLKALSPKKLTSIPKKEHPVYPYLLKGKRIRYPNQVWATDITYLKLETGYVYLVAIMDLYSRKVLSWRISLTMDAEFCC
EALKDALRNYGTPAIFNTDQGSQFTSYGFLQILKDEGVEISMDGQGRWRDNIYVERFWRTLKYEDIYLKSYESVRELKTG
LTRYFRFYNSRRFHQGLDYRTPEEMYISFQEKELKAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABK1_0264 YP_005512836.1 insB Not tested AbaR4d Protein 1e-52 50
unnamed ACF06170.1 putative transposase Not tested Tn5036-like Protein 1e-62 49