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Name : Spirs_4248 (Spirs_4248) Accession : YP_003805916.1 Strain : Spirochaeta smaragdinae DSM 11293 Genome accession: NC_014364 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 4588488 - 4589498 bp Length : 1011 bp Strand : - Note : COGs: COG0451 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR008089; KEGG: ilo:IL0564 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: nucleoside-diphosphate-sugar epimerase; manually curated; PFAM: N DNA sequence : GTGAAGAAGATACTTGTAACGGGAGCGGCGGGGTTTATCGGTCATGCAACCGTCTGTACATTGCTTGATGCAGGATGGAC GGTTGTCGGTATTGATTCGATTAATGACTATTATGATACAGCTTTGAAATATGCACGCCTTCATACGACCGGTATCGGGG AGGAGGGTGTGGAATATGGAAAAATGATAGGTTCTTCCTGTTACCCCGAATACCGTTTTATGCAATTGGCCCTTGAAGAT AGGGATGCTGTTGCCCGTCTTTTTCGGGAAGAGAATTTTGATGTTGTCTGTAACTTGGCGGCACAGGCCGGGGTTCGCTA TAGTCTGGAAAATCCTTTTGCTTATGCGGATAGCAATTTGACTGGGTTCCTTTCGATCCTTGAGGCGTGTCGTCATGCCG ACGTTTCGTATCTTGTGTACGCATCAAGTTCCAGTGTCTATGGAGAAAATCGTTCGGTGCCTTTTCGGGAAAGCGATCGG GTCGATAATCCGGTCAGCTTGTACGCTGCAACTAAAAAGGCCAACGAGCTTATGGCATCTGCCTATAGTCGCCTATACGG CTTTTCTACTGTGGGGCTCCGCTTTTTTACCGTATACGGTCCTTGGGGGCGTCCCGATATGGCTCCGACGCTTTTTCTTT CCGCAATGTTTGAAGGCAGGCCCATCAAGGTATTCAATAATGGTAATATGAAGCGGGATTTTACCTATATCGACGATATT GTCTCGGGAGTTGTACAGGTTATTTCTTCTCCTAAAAATGATGGTTCCCACACTCTCTACAATATAGGGAGGGGAAAACC TGTCGATCTCTCGGAGTTTATCGACCTCCTTGAAAAATATTCCGGACGTAAGGCCCAAAGGAATTTACTTCCCATACAGC CAGGCGATGTTCCCATCACCTGGGCCGATACCTCCTGCCTTGAACGGGATTTCGCCTACAGGCCCTCTACGCCTGTGGAA GCGGGGATCGCGCAGTTTGTTGAATGGTATCGAGAGTTTTACGGTGAGTAG Protein sequence : MKKILVTGAAGFIGHATVCTLLDAGWTVVGIDSINDYYDTALKYARLHTTGIGEEGVEYGKMIGSSCYPEYRFMQLALED RDAVARLFREENFDVVCNLAAQAGVRYSLENPFAYADSNLTGFLSILEACRHADVSYLVYASSSSVYGENRSVPFRESDR VDNPVSLYAATKKANELMASAYSRLYGFSTVGLRFFTVYGPWGRPDMAPTLFLSAMFEGRPIKVFNNGNMKRDFTYIDDI VSGVVQVISSPKNDGSHTLYNIGRGKPVDLSEFIDLLEKYSGRKAQRNLLPIQPGDVPITWADTSCLERDFAYRPSTPVE AGIAQFVEWYREFYGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-66 | 47 |
