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Name : Spirs_3786 (Spirs_3786) Accession : YP_003805466.1 Strain : Spirochaeta smaragdinae DSM 11293 Genome accession: NC_014364 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 4079802 - 4081142 bp Length : 1341 bp Strand : + Note : COGs: COG2115 Xylose isomerase; InterPro IPR001998:IPR012307:IPR013452; KEGG: rbi:RB2501_04540 xylose isomerase; PFAM: xylose isomerase; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; TI DNA sequence : ATGAAAGACTATTTTATCGGCAATAAAGAGTATTTTCCGGGAATCGGAAAAATAGCGTATGAAGGAGCGGGAACCGACAA CCCTCTCGCTTTTCGTTTTTACGATCCCGACAAAAAAATCGGAAACAAGACCATGAGGGAACACCTCAGGTTTTCCATCG CCTATTGGCACAGCTTCTGCGCAGGAGGCAACGACCCCTTTGGAGCAGATACCCACCACTTTCCCTGGGCAGTCAAGGCG GACCCCATGGAAGCGGCAAAGGATAAGGTAGATGCGGCATTTGAATTCATCACGAAGATTGACGCCCCCTTTTACTGTTT TCACGACCGGGATCTTGCTCCCGAAGGGAAGAGCATTGCGGAAAGTGAAAAAAACCTGATGGAGCTGGCAGGCATGGCAA AGGAGCGCCAGGAGGCCACCGGTGTCAAACTTTTGTGGGGTACGGCGAATCTCTTCAATCATCCCCGATTCATGAATGGA GCGGCTACCAATCCCAATTTCGATGTCATTCCCTTTGCCGCGGCCCAGGTAAAGGCAGCCATCGACGCAACGATTCTCCT TGGCGGAGGAGGATATGTATTCTGGGGCGGACGAGAGGGCTACATGAGCCTTCTGAACACCGACATGAAGCGGGAAAAAG AGCACCTGCTCCGTTTTCTCACCGCTGCCAGGGATTACGGCCGCAAGGCAGGTTTCAAGGGAACCTTCATGATTGAGCCC AAGCCCATGGAGCCGACAAAGCACCAATACGACTACGATGCGGAAACCGTTGCCGCCTTCATCAAAACAAACGGTCTGGA AAAGGATTTTGCCATCAACATCGAAAACAACCACGCGACCCTCGCCGGCCACACGTTCTGGCATGACCTCCAGGTAGCTG CAGACAACGGCCTCCTCGGCAGTGTCGACGCGAACCAGGGAGACTATCAGAATGGCTGGGACACTGACCAATTTCCCTCG AATGTCTATGAGACGGCAAGGGCAATGATGGTGATCCTCGAAAACGGTGGATTCACCTACGGAGGCCTCAATTTCGACGC CAAGCGCCGGCGAAACTCCACCGATCCAGCAGACCTCTTCTATGCCCATATCGGCGGAATGGACGCCTTTGCTCTCGGTC TGGAAATCGCCTACAACATCAATACAAAAAGCGAATTGCCCAAGCGCAAAAGCACGCGCTACGCCTCCTTCGATTCGGGT AAGGGAGCGGAATTCGAGGCGGGAAAGCTCTCCCTTGAAGAATTGCGCAACATCGCTCTTGACGCCAGGGAGCCGGAAAC CATCAGCGGAAATCAGGAACTTCTGGAAAATATCCTGAACCGCTACATGTTCGTGCGCTGA Protein sequence : MKDYFIGNKEYFPGIGKIAYEGAGTDNPLAFRFYDPDKKIGNKTMREHLRFSIAYWHSFCAGGNDPFGADTHHFPWAVKA DPMEAAKDKVDAAFEFITKIDAPFYCFHDRDLAPEGKSIAESEKNLMELAGMAKERQEATGVKLLWGTANLFNHPRFMNG AATNPNFDVIPFAAAQVKAAIDATILLGGGGYVFWGGREGYMSLLNTDMKREKEHLLRFLTAARDYGRKAGFKGTFMIEP KPMEPTKHQYDYDAETVAAFIKTNGLEKDFAINIENNHATLAGHTFWHDLQVAADNGLLGSVDANQGDYQNGWDTDQFPS NVYETARAMMVILENGGFTYGGLNFDAKRRRNSTDPADLFYAHIGGMDAFALGLEIAYNINTKSELPKRKSTRYASFDSG KGAEFEAGKLSLEELRNIALDAREPETISGNQELLENILNRYMFVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 5e-92 | 53 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 4e-92 | 53 |
