Gene Information

Name : Spirs_3684 (Spirs_3684)
Accession : YP_003805364.1
Strain : Spirochaeta smaragdinae DSM 11293
Genome accession: NC_014364
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 3971307 - 3972176 bp
Length : 870 bp
Strand : +
Note : COGs: COG0214 pyridoxine biosynthesis enzyme; InterPro IPR001852; KEGG: mhu:Mhun_2322 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; SPTR: Vitamin B6 biosynthesis protein; TIGRFAM: pyridoxine biosynthesis protein; PFAM: SOR/SNZ

DNA sequence :
ATGGACAGGTCACGAGAAAAGATCAACAAGGGTTTCGCCGAAATGTTCAAGAACGGCGTCATCATGGATGTAACAACCCC
AGATCAGGCAAAGCTCGCCGAAGATGCCGGAGCCTGTGCGGTCATGGCACTTGAACGGGTGCCCGCCGATATCAGAAAGG
CGGGGGGCGTGGCACGGATGAGCGATCCGGCCATGATCCGTTCGATCATGGAAGCGGTGAGCATCCCTGTGATGGCAAAA
TGCAGGATAGGTCACATCACCGAGGCACGTATCCTGGAGGCGCTGGAGATAGACTTTATCGACGAGAGCGAGGTGCTGAC
GCCCGCGGATGAAGAACGCCACATAGACAAGAAGCTTTTCAAGGTTCCCTTTGTCTGCGGTGCAAGAAACCTTGGTGAGG
CACTTCGGCGTATCAATGAAGGGGCAAGCATGATCAGAACCAAGGGCGAAGCGGGTACCGGCAACATCGTCGAAGCGGTT
CGCCACACCAGAACGATTGCAGGCGAGATCGCCGGCCTGCAGGGGCTCGACGAGGAAGGTCTTAAGCGGAAAGCTGCCGA
ATACCGGGTACCCATAGAACTTGTAGAACAGACGGCCACATTGAAAAGAGTTCCGCTAGTCAACTTTGCCGCCGGCGGGG
TTGCAACACCGGCTGATGCAGCCCTCATGATGGAGCTGGGCAGCGATGGTGTCTTTGTCGGGTCCGGCATCTTTACCAGC
GAACATCCGGAAAAGATGGCGGCGGCGATTGTGGAAGCGGTTATTCACTACCAGGACCCGAAACGCCTGGCCGACATCTC
ATCCGGCTTGGGGGCCGCCATGAAGGGGCTTGAGATAGCCACGCTCCAGACGGTTATGGCGGGAAGATGA

Protein sequence :
MDRSREKINKGFAEMFKNGVIMDVTTPDQAKLAEDAGACAVMALERVPADIRKAGGVARMSDPAMIRSIMEAVSIPVMAK
CRIGHITEARILEALEIDFIDESEVLTPADEERHIDKKLFKVPFVCGARNLGEALRRINEGASMIRTKGEAGTGNIVEAV
RHTRTIAGEIAGLQGLDEEGLKRKAAEYRVPIELVEQTATLKRVPLVNFAAGGVATPADAALMMELGSDGVFVGSGIFTS
EHPEKMAAAIVEAVIHYQDPKRLADISSGLGAAMKGLEIATLQTVMAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-75 63
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-75 63
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-75 63