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Name : Spirs_3661 (Spirs_3661) Accession : YP_003805341.1 Strain : Spirochaeta smaragdinae DSM 11293 Genome accession: NC_014364 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 3945606 - 3947804 bp Length : 2199 bp Strand : - Note : COGs: COG2183 transcriptional accessory protein; InterPro IPR006641:IPR018974:IPR003029; KEGG: sfu:Sfum_1838 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold DNA sequence : ATGGACGATGCGTTGATACAGGCCGTGACCCTCGAGACGGGGCTACTGGAGCGAGGGGTTCGAGCCGTTATTGAACTTTC GGCTTCAGGAGCGACGGTTCCTTTTATCGCCCGGTATCGCAAAGAGGCAACGGGCGAACTTGATGAGGAAGAGATCAGAG GGATACTCGAGGCAAAGGAGAAGACAGCGGCGCTCTGGAAGCGGCGGGAGTCTATTCTTGACAGTTTGAAAGAGCGTGAT CTTTTAAACACCGACTTGGAGAAGGCCCTTTGCCAGGCAACGGCCCTTTCCGAGCTTGAGGATCTCTACCTTCCTTTCCG CCCCAAACGAAAGACTCGAGCCTCGGCAGCCAGGGAAGTTGGTCTTGAGCCTCTTGCGGAGCTTCTTGTTTCCGGACGCT GTGATGATGTGGATGCTGCTGCCGCCGATTTTATTGATCCGGATAAGGGGACTACGAGTGTCGAGGATGCCCTCGGAGGT GCCCGGGATATCATTGCCGAGGAAATCTCGGAGTCCGCGGCGGTGAGGGCTTGCCTTCGTGAACTTTTTGCTCGAAAGGC CATATTTTCTGCTATCTCCGTGAAGAAGAGGTGCGAGGAAGATCCGAAAGGCTCTGCACGGTTTCGTGACTATTTCGACT GGAGTGAAGCTGTGAAAGGCGTTGCCGGACACAGGGTCCTTGCGGTTCGCCGTGGGGCAGCCTTGGGCTTTTTACGTTGG CACCTCCTGCCTCCCGAGGAGGATGCCCTCCTTTCTGTTAAGCATCTTTCCATGCGGGTAGGGGGCGTTCCATCTTCCCT TGAAGCCTCGGAAGGGCCTCATACCCCGTTGCACGGAGAGGCTGCAAAGCAGGTTGCTTCGGCTGCCGAGGATGCCTACT CCAGGCTTTTGGCCCCTTCCCTTGAAACCGAATTGAAATCGGTCCTGGTGGCCCGGGCCGAAGAGGAGTCTATCCTCCGT TTCGGAGAGAATCTGCGGGAGCTTTTGCTTCAGCCTCCCCTTGGGCCCCGCTCCGTTTTGGCCCTTGATCCCGGCCTTCG AACGGGATGTAAGCTTGCGGTGATCTCCTCAGGAGGAGCGCTTTTAGAGCATGATGTCATCTTTCCCTTACCACCTCAGA ATAAAAAGGTGGAGGCTACCCGCAGAATTCTCGAGTTGATTGCGCAGTACGGTATCGAGGCCGTGGCTGTGGGCAACGGG ACCGGCGGCCGTGAGAGCGTCGACTTTCTGAAGGAGGCCGGACTTCCGGCTTCCGTTAGCGTGGTGAGTGTGGACGAGAG CGGTGCATCGGTTTATAGTGCCTCGCCCCTTGCCAGGGAGGAGTTTCCCGACCAGGATGTCACGGTCCGGGGCGCAGTCT CCATCGGACGGCGCTTGCAGGATCCCCTCGCCGAATTGGTGAAAATCGATCCCAAATCGATCGGGGTCGGCCAGTATCAG CACGATGTTGATCAGAAGGCACTGAAAAAGGCCCTGGATCAAACCGTAGAGAGCTGTGTAAATAACGTCGGAGTCGAGCT GAACAGCGCTTCGGTACGGCTATTATCCTATGTCAGTGGGGTCGGAGAAAAGCTTGCATCCTCTCTCATCGCTTTTCGCA ATGACAACGGCCCCTTTCAAAGTCGCAGCCAGCTACTTTCGGTCCCGGGCCTCGGCCCGAAGGCATACGAACAGGCCGCC GGCTTCCTTCGAATTCGGGGAGCGAATAATCCTTTGGACGCCTCTGCCGTTCATCCCGAGCGTTACACCTTGGTTGAAAA GATGGCCGTCACTGTCGGAGTCTCCGTTGGCGATTTGATTGGTGACGACAATACGGTACGATCGACCATCGACCTTCATT CCTATATTAATGAACATACCGGGATGGCCACTCTGCGTGATATCATGGCCGAGCTTGAAAAGCCAGGCCGGGATCCGAGA AGCCCCTTTGAAATTTTCTCTTTTGATGAAGGCGTTAGAAGCCCCGAGGACCTTCGGGAGGGGATGATTCTTCCCGGTAT TGTTACCAACATTACCTCCTTCGGCGCCTTTGTCGATATTGGCGTTCACCAGGATGGTCTTGTTCATATCAGTCATCTTG CCGATCATTTTGTAAAGGATCCTGCGGAAGTAGTCCGGCTCAAGCAGCAGGTACAGGTCAAGGTTATTTCCGTCGATCTT GAGAGGCGTAGGATCGGATTGTCCATGAAAAGAGAATAG Protein sequence : MDDALIQAVTLETGLLERGVRAVIELSASGATVPFIARYRKEATGELDEEEIRGILEAKEKTAALWKRRESILDSLKERD LLNTDLEKALCQATALSELEDLYLPFRPKRKTRASAAREVGLEPLAELLVSGRCDDVDAAAADFIDPDKGTTSVEDALGG ARDIIAEEISESAAVRACLRELFARKAIFSAISVKKRCEEDPKGSARFRDYFDWSEAVKGVAGHRVLAVRRGAALGFLRW HLLPPEEDALLSVKHLSMRVGGVPSSLEASEGPHTPLHGEAAKQVASAAEDAYSRLLAPSLETELKSVLVARAEEESILR FGENLRELLLQPPLGPRSVLALDPGLRTGCKLAVISSGGALLEHDVIFPLPPQNKKVEATRRILELIAQYGIEAVAVGNG TGGRESVDFLKEAGLPASVSVVSVDESGASVYSASPLAREEFPDQDVTVRGAVSIGRRLQDPLAELVKIDPKSIGVGQYQ HDVDQKALKKALDQTVESCVNNVGVELNSASVRLLSYVSGVGEKLASSLIAFRNDNGPFQSRSQLLSVPGLGPKAYEQAA GFLRIRGANNPLDASAVHPERYTLVEKMAVTVGVSVGDLIGDDNTVRSTIDLHSYINEHTGMATLRDIMAELEKPGRDPR SPFEIFSFDEGVRSPEDLREGMILPGIVTNITSFGAFVDIGVHQDGLVHISHLADHFVKDPAEVVRLKQQVQVKVISVDL ERRRIGLSMKRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 3e-129 | 46 |
