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Name : Spirs_3533 (Spirs_3533) Accession : YP_003805215.1 Strain : Spirochaeta smaragdinae DSM 11293 Genome accession: NC_014364 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : 3.6.3.25 Position : 3799480 - 3800460 bp Length : 981 bp Strand : - Note : COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR003439:IPR013611:IPR017871; KEGG: clo:HMPREF0868_0377 ABC transporter ATP-binding protein; PFAM: ABC transporter; transport-associated OB domain protei DNA sequence : ATGACCAATGAAGTAAAGCTTGAGATTCGCAATATGACGAAGAAATACAAAAACGGCGACGGGGTCGAAAACATCAATCT AAAGGTAAAAACGGGGGAACTGGTGACACTTCTTGGGCCTTCAGGCTGCGGGAAGACAACGATCCTGCGAACCATCGGAG GATTCCTTGAGTGTACCGAAGGAAATGTACTTATAGACGATAAAAATATTGAGCATCTGCCGCCGGAAAGGCGCCCTACC GCCATGGTGTTTCAAAGCTATAACCTTTGGCCCCATATGACCGTGTATGAAAATATGGAATTTGGTTTGAAGCTGCGAAA GATTCCCAAGGTGGAAAGACATAGGCAGATTATGGCGATGATGGAACTCGTAAAGATTACCGGCATGGAGAAAAAATATC CGGGCCAAATGTCGGGCGGTCAGCAGCAGCGGGTTGCCATAGCCCGGTCACTCCTGTTGAAGCCCGATGTCCTCTTGCTG GATGAACCCTTTTCCGCGCTTGACGCCAAGATACGTTCTCAGATGCGGGAGGAATTACGCAAGATACAACTGGACCTGAA TATCACCGTGGTCTTTGTCACTCACGACCAGGAGGAGGCCATGGCCTTATCCGACAGAATTGTGGTGATGAATAAAGGAA GTTTCGAGCAGGTTGGTACCCCCGCTGAAATTTACGATAAGCCGATAAATCATTACGTCGCCGATTTTATCGGTGATATG AACTTCATAGAAATGGAAGATAAAACGATAGCGGTGCGCCCGGAGTATGTCACTATCGTTTCTTCTGAGGCGGGGGGAAT TGCCGGTACCATTAGGGCCGTTATGATACTGGGGCACTATAGTGAAGTGACGCTGGATACCGAATATGGCATCCTAAAGT CCTTTATCGTCGGTGAGAGTGCCGAGCAATTCCATCCTGGTAAGAAGGTCTCTCTTTCCTATTCAAAGAGCATAGAGTTC TCAAGACGAAAAGGAGGTTAA Protein sequence : MTNEVKLEIRNMTKKYKNGDGVENINLKVKTGELVTLLGPSGCGKTTILRTIGGFLECTEGNVLIDDKNIEHLPPERRPT AMVFQSYNLWPHMTVYENMEFGLKLRKIPKVERHRQIMAMMELVKITGMEKKYPGQMSGGQQQRVAIARSLLLKPDVLLL DEPFSALDAKIRSQMREELRKIQLDLNITVVFVTHDQEEAMALSDRIVVMNKGSFEQVGTPAEIYDKPINHYVADFIGDM NFIEMEDKTIAVRPEYVTIVSSEAGGIAGTIRAVMILGHYSEVTLDTEYGILKSFIVGESAEQFHPGKKVSLSYSKSIEF SRRKGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-34 | 41 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-34 | 41 |
