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Name : Spirs_3513 (Spirs_3513) Accession : YP_003805195.1 Strain : Spirochaeta smaragdinae DSM 11293 Genome accession: NC_014364 Putative virulence/resistance : Resistance Product : ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 3780172 - 3781971 bp Length : 1800 bp Strand : - Note : COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR003593:IPR001140:IPR003439:IPR017871:IPR 017940; KEGG: pgn:PGN_1917 ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA DNA sequence : ATGCCTGAAAAGAAAAAAGAATTTGTCTTACAGCGGTTTTTACCTTATATGGGTAAAAAGAAAGCGCTTTTGCCTTTGGC TTTGGTATTATCGGGAATTTCCGCAATACTCAATATCCTGCCTTTTGTGCTGGTATGGTACATAACACGCAATATCCTCT CAAACCCTTCGGCGATTGACATGACCCGTGTTGGCTTCTATGCATGGGTAGCGTTTGCCTGTGCCTTGGGCGGTGTTGTC TTTTACTTCTGTGCGCTTATGAGCTCCCACCTTGCTGCCTTTCGGGTGGAGGTAGGTATGCAGAAGATCGGCATGCAAAA GATCCTGTCGATGCCGCTGGGCTTTTTCGATAAGCACTCCAGCGGAAAAATCCGAAAGATCGTAAACGACGGGGCCGGTA CGACACACACCTTTTTGGCGCATCAGCTTCCGGATATGGCGGGCAGTATCATCTCTCCCATAATCCTTTTGGTGCTGCTG TTTGTCGTGGACTGGAGGATGGGGCTTGCGTCCCTTTTTCCCATTATCCTGGGATTCATCACCATGAAATTCATGATGAG CTCTCAGGGAAAAACGTTCCAAAAGAAGTATTTCGATTCTCTGGAGGAGATGAGCTCGGAATCCGTGGAATATATCCGCG GTATTCCGGTTGTGAAAACCTTCGGACAAAGTATTTTTTCATTTAAGCGTTTTCACGACAGCATTATCCGATATAAGGAG ATGGTGCATGCCTATACACTGCTCTGGCGAAGGCCCATGTCGTTTTATACCGCGATTATGGAATCCGCCGGCTTCTTTTT AATTCCCATTGCAATCCTATTAATCGGAAGGGGAGCCGAGATCCCTCTCGTGCTGGCCGATTTCGTCTTTTACATGTTGA TTTCTCCTATCTTTACCCTGCTTTTGATGCGTTCCATGTATTTTCAGCAGAATGCAATGATCGCGGAACAAGCCATCGAC AGACTGGATAAGCTTTTACAGTATCCGGGCCTTGGGTATAGCGAAATCACAAAAGAAATTATGAATCACCGCCTGGAATT CAAGGATGTTGTATTTTCCTACGAAGGCAGTGATCAGCCCGCCCTTGATGGTGTCAGCTTTACGTTACACGAAGGCGAAA CAATTGCTTTAGTCGGCGCATCGGGAGGAGGCAAAACAACCATTGCCCGGCTGGCTGCGCGTTTCTGGGATGTGGATGAG GGGGAAATTCTGGTCGGAGGGATAAATGTCAAGGATATCCCCAGGAAAGAACTGATGGATACGATCTCCTTTGTTTTTCA AACCACGCGACTGTTTAAAGGTCCTTTACGGGAAAATATCGTTTTTGGAAAGAAGAATGTTGATGACGATACCATTTCCC AGGCCATCGATTCCTCACAGTCGAGGGAAATAATTGACAAACTTCCGGATGGACTGGACACGGTAATCGGTTCCAAAGGA ACCTATCTATCGGGCGGAGAACAGCAGCGGATCGCCCTTGCCAGAGCCATAGTCAAAGATGCCCCCATCGTGCTTTTGGA TGAAGCCACTGCTTTTGCAGATCCGGAAAACGAGCACCTCATCCAGAAGGCTCTGAAAGAGCTTAGCCGGGGAAAGACGA CACTGATGATTGCCCATCGGCTTACCACCGTACAACATGTCGACCGGATTCTGGTGATTGAGCGCGGAAGGATCGCGGAG GAAGGCACTCACCAACAGCTGCTGGATAACGGCGGGATCTATAAGACCATGTGGGATGAATATCAAAGGTCCGTTGCCTG GAAAATCGCGGCCAAAGAGACTGTGGGTATAGGAGAATAA Protein sequence : MPEKKKEFVLQRFLPYMGKKKALLPLALVLSGISAILNILPFVLVWYITRNILSNPSAIDMTRVGFYAWVAFACALGGVV FYFCALMSSHLAAFRVEVGMQKIGMQKILSMPLGFFDKHSSGKIRKIVNDGAGTTHTFLAHQLPDMAGSIISPIILLVLL FVVDWRMGLASLFPIILGFITMKFMMSSQGKTFQKKYFDSLEEMSSESVEYIRGIPVVKTFGQSIFSFKRFHDSIIRYKE MVHAYTLLWRRPMSFYTAIMESAGFFLIPIAILLIGRGAEIPLVLADFVFYMLISPIFTLLLMRSMYFQQNAMIAEQAID RLDKLLQYPGLGYSEITKEIMNHRLEFKDVVFSYEGSDQPALDGVSFTLHEGETIALVGASGGGKTTIARLAARFWDVDE GEILVGGINVKDIPRKELMDTISFVFQTTRLFKGPLRENIVFGKKNVDDDTISQAIDSSQSREIIDKLPDGLDTVIGSKG TYLSGGEQQRIALARAIVKDAPIVLLDEATAFADPENEHLIQKALKELSRGKTTLMIAHRLTTVQHVDRILVIERGRIAE EGTHQQLLDNGGIYKTMWDEYQRSVAWKIAAKETVGIGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-105 | 41 |
