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Name : Spirs_2744 (Spirs_2744) Accession : YP_003804442.1 Strain : Spirochaeta smaragdinae DSM 11293 Genome accession: NC_014364 Putative virulence/resistance : Unknown Product : alpha amylase catalytic subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.10 Position : 2937420 - 2939144 bp Length : 1725 bp Strand : - Note : COGs: COG0366 glycosidase; InterPro IPR006047:IPR006589; KEGG: afl:Aflv_2271 oligo-1,4-1,6-alpha-glucosidase (sucrase-maltase-isomaltase); PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: alpha amylase catalytic regio DNA sequence : ATGAAAAGCGGGGCCGAACACGAACGACGATGGTGGAAAGAGGGGGTAGTATACCAGATTTACCCCCGAAGTTTTGCCGA TAGCAACGGAGACGGGATCGGTGATGTACGGGGAATTATCAATCACCTTGACTATCTCAAATGGTTGGGAATCGATATCG TTTGGCTTAATCCCATCTACCGGAGCCCCAACGACGACAACGGCTACGATATTTCCGATTATCGTTCCATCATGGAGGAT TTCGGGACGATGAGTGATTTCGATGAGCTCTTAACCGGTCTTCACGACAGAGGCATCCGTCTTATCATGGATCTGGTTGT CAACCATACCTCGGATGAGCATCAATGGTTTATCGAGAGCAGGAAAAGCCGTGATAATCCCTATCGCAACTACTATATCT GGCGGCCTCCCGCTGCGGACGGCGGTGTGCCGAATGACTGGCAGAGCTTTTTCGAGGGGCCTGCCTGGGATTTCGACGAA GCGACAGGGGAATATTACCTTCATCTCTTTTCGAAAAAGCAGCCCGATCTCAACTGGGAAAACGAGAGGGTACGTGAAGA GGTGTATGATCTCATGGGATTTTGGCTGGACAAGGGGATCGACGGCTTCCGTATGGATGTGATCAATCTTATCAGTAAGC GCCCAGGTTTACCTAACTCCCGTAAAGGTTCCACAAGCCGTATCGTCGGTGGAGAACATTTTATCAACGGTCCCCGTTTG GAAGCGTATCTCTCTCAGCTTCGCGGCAAGGTTCTTGACGGACGGGATATCATGACCGTGGGAGAGACCCCCGATGTGAC CCCCGAAATTGGTCTGCGTTATGTAGGGAAAGAGCAGGGGGCCCTGAATATGTTGTTCAGCTTTGAGCATATGGACATCG ACTTTGGTAAGGGGGGATCCTGGGATATCGATAGCTGGACCCCTGCCGAACTTTTCTCGATTTTTGCCCGCTGGCAGATG GCCCTTAACGGAAAGGGGTGGAACAGCCTTTTCCTGAACAACCATGATCAACCCCGACAGGTGAGCAGGTTCGGAGACGA CGGTGTGTATCGAAACAGGTCTGCAAAGTTGCTTGCCCTTTTTTTGCACACCCTTCAGGGAACGCCCTATGTCTATCAAG GTGAAGAGATCGGGATGGCCAATGTTCCCTTTACCTCGATCGATGAGTGCCGTGATATCAGCAGCAGGAATTACTGGAAA CGTGCCGTGCAAGAGGGGCAAAACAAGGAAGAGGTCTTTCGACGTATTTTGTATCGGGGACGAGACAATGCCCGAACCCC CATGCAGTGGAACGATTCTCCCCATGCCGGATTTAGTTCCGTCGAGCCTTGGATCGCCTGCAACCCCGATTATCATCGGA TAAACGTATCAATGCAGAAAACCCAAGAGGATTCGATCCTCTGGTTTTACCGTCGCCTCATCGCCCTCCGTAAGGTTCAT CCCGTTTTTGCCTATGGCTCTTTTGAAGAGATTGCCGGCAGCAGCGGAGGCCTTATTGCCTATCGGCGGGAAGATGGACC CTCGCAGGAAACCCTTCTTGTCGTTCTCAACTGGAGCGGCGACCAAGCGGTCCAATCCCCGGCAGTTAACCGGGCGATCA AGGAGACCGAAGGGGATAGGATACTTCTTACAAGCTGTGAGGATGATCCCAACCGCCTCACAGCCCTGGCTGCCGGTGAG CCCTTTCTTCCCTGGGAAGCTGTCGCCATTCTCTGTGATGGGTAG Protein sequence : MKSGAEHERRWWKEGVVYQIYPRSFADSNGDGIGDVRGIINHLDYLKWLGIDIVWLNPIYRSPNDDNGYDISDYRSIMED FGTMSDFDELLTGLHDRGIRLIMDLVVNHTSDEHQWFIESRKSRDNPYRNYYIWRPPAADGGVPNDWQSFFEGPAWDFDE ATGEYYLHLFSKKQPDLNWENERVREEVYDLMGFWLDKGIDGFRMDVINLISKRPGLPNSRKGSTSRIVGGEHFINGPRL EAYLSQLRGKVLDGRDIMTVGETPDVTPEIGLRYVGKEQGALNMLFSFEHMDIDFGKGGSWDIDSWTPAELFSIFARWQM ALNGKGWNSLFLNNHDQPRQVSRFGDDGVYRNRSAKLLALFLHTLQGTPYVYQGEEIGMANVPFTSIDECRDISSRNYWK RAVQEGQNKEEVFRRILYRGRDNARTPMQWNDSPHAGFSSVEPWIACNPDYHRINVSMQKTQEDSILWFYRRLIALRKVH PVFAYGSFEEIAGSSGGLIAYRREDGPSQETLLVVLNWSGDQAVQSPAVNRAIKETEGDRILLTSCEDDPNRLTALAAGE PFLPWEAVAILCDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 8e-133 | 51 |
