Gene Information

Name : Spirs_2369 (Spirs_2369)
Accession : YP_003804078.1
Strain : Spirochaeta smaragdinae DSM 11293
Genome accession: NC_014364
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2543280 - 2543990 bp
Length : 711 bp
Strand : -
Note : COGs: COG0689 RNase PH; InterPro IPR018336:IPR001247:IPR015847:IPR002381; KEGG: pst:PSPTO_0077 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: uncharacterized protein; TIGRFAM:

DNA sequence :
ATGCGGGATGTTCAATTTCAAACATCCTATCTGATTCACCCAGCCGGTTCCTGCCTCGCATCCTACGGTGATACAAAGGT
TATCTGTACCGTCTCCCTTGAAGATCGTGTTCCTTCCTTTTTAGAGGGAAGGGGCTGCGGCTGGCTTACCGCCGAGTATG
GTATGCTGCCTGGCAGTACCGGGGGCGGAAGAAAGCAGCGGGAGATCGGTAAACGGGACGGCAGAAGTACCGAGATTCAG
CGTCTCATCGGACGGAGCCTCCGTGCATCCGTTGATATGGAGAAACTTGGCGAACGGACCCTGACCGTCGACTGCGATGT
CATTCAGGCCGATGGTGGCACAAGAACTGCATCGGTTTCCGGGGGATGGGTAGCGCTCTATGAGGCGCTTAGTGCGCTTG
CCGAACGGGAAGGGCGGGGTGGTGCCGACTATTATCTCAAGGGACAACTCGCCGCCGTGAGTGTCGGTATTGTGGACGGA
CAGGTCGTCTGTGACCTCGACTATGCGCACGATAGTCGGGCCGAGGTTGATATGAACATTGTGAAACTGGAAGAGGCCTT
TGTAGAACTCCAGGGAACGGGAGAGAAGGGAACCTTTTCCTCCGAACAACTTGCTTCGCTTATCGCCGCTGCCGACGAAG
GGCTTACGTTCATTTTTCAAAAACAGCGTGATGCCCTCAAAATCGATTCCGGCTTTACTTTCCGACAATAA

Protein sequence :
MRDVQFQTSYLIHPAGSCLASYGDTKVICTVSLEDRVPSFLEGRGCGWLTAEYGMLPGSTGGGRKQREIGKRDGRSTEIQ
RLIGRSLRASVDMEKLGERTLTVDCDVIQADGGTRTASVSGGWVALYEALSALAEREGRGGADYYLKGQLAAVSVGIVDG
QVVCDLDYAHDSRAEVDMNIVKLEEAFVELQGTGEKGTFSSEQLASLIAAADEGLTFIFQKQRDALKIDSGFTFRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-45 49