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Name : Spirs_1676 (Spirs_1676) Accession : YP_003803397.1 Strain : Spirochaeta smaragdinae DSM 11293 Genome accession: NC_014364 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1797690 - 1798973 bp Length : 1284 bp Strand : + Note : COGs: COG1593 TRAP-type C4-dicarboxylate transporter large permease; InterPro IPR004681:IPR010656; KEGG: amt:Amet_0552 TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transporter permease DctM subunit; SPTR: TRAP dicarboxylate tra DNA sequence : ATGAATCTGGTTGTCATAATCTGTCTGTTAATGCTCGTACTTCTTCTCCTGAAAGTACCAGTATTCGTTGCAATAGCCGT ACCAACGGTGCTCTACTTTCTGTTTACTCCGGGAATCGCAACCCTTACCATTGCCCAGCGTGTAATTTCCGGTGTCGAAA GCATTCCGCTTTTAGCGGTTCCCTTTTTTGTTTTTTCCGGTATTATCATGAATTATTCCGGTGTTACCAAACGAATCATG GAATTTGCGGAGGTTCTGACCGGCAGAATGTACGGGGGACTTGCCCAGGTGAATGTTTTGCTTTCCACCCTGATGGGGGG ATTGTCCGGCTCCAATCTGGCAGATGCCGCCATGGAAGCAAAAATGCTCGTTCCTGAAATGAGAAAACGCGGATACTCAA ATGAATTTTCTACCGTCGTAACAGCGTCTTCCTCGCTGATCACTCCCATGATTCCTCCCGGAATTGCAATGATCCTGTAT GGTTCTGTTGCCAACGTGTCGATTGGTAAACTTTTTGTTGCAGGTATCGGTCCCGGACTGATCATGTGCCTTTCTATGAT GGCTCTGGTTAGTGTCATCGCACGGAAAAGACACTATGCCAGAATGAGGGAACGTCATGCATCTCCCAAAGAAATCTGGC ACGTAATTAAACGGGCTTTTTTCCCTCTCTGTCTTCCTGTCATCATTATCGGTGGCATTCGCGTAGGTATTTTTACCCCT ACCGAGGCTGGTGCAATTTCCATTATCTATGCCCTGATATTGGGCCTGGTATATAAAGAACTTTCCTGGGACAAGCTGGT TCTTTCCATTATGGAAACAATTCGGACCACAGCATCGATCATGTTGATTGTCGGCATGGCATCGGCTTTTGCATGGATGC TGACAAGGGAGCGGATTCCCCAAACCATAACAGAAACAATTGTCAGAATTATCAGCAACAAGTACGTATTTTTGCTTGTC GTCAATCTGTTTTTGCTATTTGTGGGGATGCTCATCGAGGGGGGAGCAGCTACTATTGTTCTGGCACCGCTTCTGGCTCC TGCCGCTGCCTCCTTCGGCATTGATCCAATTCAGTTTGGTATGGTAGTGATTTTTAATCTTGCCGTTGGTTGCATTACTC CCCCTTTGGGGACCGTTATGTTTGTTACCTGCCAGATTACCGGGTGTAAGGTTAATAAGTTTGCCAAGGAAGCGGTACCT TTCTTTTTTCTGTTTCTTGGTATCCTGCTATTGCTGACATATGTACCCTTTTTCTCGACATTTCTTGTGAACTTAATATA TTAA Protein sequence : MNLVVIICLLMLVLLLLKVPVFVAIAVPTVLYFLFTPGIATLTIAQRVISGVESIPLLAVPFFVFSGIIMNYSGVTKRIM EFAEVLTGRMYGGLAQVNVLLSTLMGGLSGSNLADAAMEAKMLVPEMRKRGYSNEFSTVVTASSSLITPMIPPGIAMILY GSVANVSIGKLFVAGIGPGLIMCLSMMALVSVIARKRHYARMRERHASPKEIWHVIKRAFFPLCLPVIIIGGIRVGIFTP TEAGAISIIYALILGLVYKELSWDKLVLSIMETIRTTASIMLIVGMASAFAWMLTRERIPQTITETIVRIISNKYVFLLV VNLFLLFVGMLIEGGAATIVLAPLLAPAAASFGIDPIQFGMVVIFNLAVGCITPPLGTVMFVTCQITGCKVNKFAKEAVP FFFLFLGILLLLTYVPFFSTFLVNLIY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 5e-48 | 42 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 4e-48 | 42 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 5e-48 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spirs_1676 | YP_003803397.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 2e-48 | 42 |
