Gene Information

Name : Spirs_1325 (Spirs_1325)
Accession : YP_003803046.1
Strain : Spirochaeta smaragdinae DSM 11293
Genome accession: NC_014364
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1411499 - 1413622 bp
Length : 2124 bp
Strand : -
Note : COGs: COG1200 RecG-like helicase; InterProIPR019793:IPR011545:IPR001650:IPR004609:IPR 014001:IPR014021; KEGG: tde:TDE2579 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase; SPTR: ATP-dependent DN

DNA sequence :
ATGTTCCTGGGAGAATTGCGCAAGCCGGTCACCGTGCTCCACGGAGTCGGTAAAAAAAGCACGGAAAGGCTCGCCCGTCT
TGGAGTAAGGCATATTGCCGATCTGCTCCGTCTGCTGCCCAGACAATGGGAGGATCGGAGTCGCCTTGTCCCCATAGTCC
GGGCCGGTGATGCCAGACCCGCTCTCACCGTGGTGGAAATTGTTGCCCACGACTGGTTTGGAAAACCTCATAATCAAACG
CTGAAGGTGTTTGTTCAAGATGAAACCTCAGTCGCCGTGCTGCTCTGCTTTAATCGGAATTTCCTGGCCGGGAAACTGCC
TGTTGGTGCACGTATCCTCCTCTACGCACCGCTCCAGCATCGCTTTGGGGAACTTCAGGCAGCCTCCTTTGATTTCGTTC
CCGCAGGAAAGTACCCCCTCACCAGGGAAGAGGATTATCTTAGCGAGGTGCCGAAGATCTCGGGGCGAGGAGGCATTGGT
TCCATCCTGCCGGTATATCCCCTTACCGAGGGATTGACGCAAGGGGCTCTGCGAGACCTGATGCAGCAAGCGATGGAGGG
CTTCGGCAAATTCGTGGATGATGAACTGCCTGAAGCAATACGCCGGGATCACGGACTGCCCCATCTTGCCGAGGCACTGG
TCATGATTCATCGTCCTCGCCGGATCGAGGAGCCGGAGGAGGGGCGCAAGGCCCTCGCCTTCAATGAACTCTTTCATCTG
CAATGTGCCGTCACAAGACGCGGAGCCCTTCGCAAGCGAAAGGAACGTCCCTCCCTGGCCCTGGAAACAGGCCTTGTCGA
TCGTTGTATCAGGGATCTTCCCTTTTCTCTCACCGCCGATCAAAAGCAGGCGGTCGAAGAGATCATAGAAGATCTGAAAC
GGCCCTACCCCATGGCAAGACTCCTGCAGGGGGATGTCGGATCGGGAAAAACCCTCACGGCCCTCCTTTCCGCCTTGCCG
ATCATCGAAGCAGGTTATCAGGTTGCCTTCATGGCACCGACCGAACTTCTTGCCCGTCAGCATGCGGAAAACAGCGCCAG
AATACTTGCTCCTCTTGGGGTGAGAATCGCCCTGTTCACCGGAAGTATCCCAAGCCCGGCAAGAAAGGAGCTTCTTGTCG
CCCTTCAAGAGGGAGAAATCGATCTTGTGGTTGGGACCCATACCCTCTTCTCCTCTTCCGTTCGCTTTCGCCGCCTGCGC
TACTGTATCATCGACGAACAGCATAAGTTCGGGGTTATGCAGCGGCAGGGGCTTTTGGACAAGGGGGAATTTCCCGACCT
TCTGACGATGACCGCCACGCCCATTCCCAGAACCATGGCCCTCACCGCCTTCGGGGACCTTGCGGTATCGGTCATCAGGA
CCATGCCGCCGGGAAGAAAACCGATCATTACCCATCTTGCAAAGGTCGAAAACAGGCCGAAGGTCTATGCCGCGGTCGAG
AAGGAACTTGAACGGGGAGGACAGGCCTATTTTGTCTATCCCCTGATCGAAGAGGGAAGCAGGGAGAAGATCGACAGCGC
GGAGAGTATGTACCGTCTGCTGCGGGAGGAGGTATTTCCCCAAAGGAGGATCGCTCTTCTTCATTCCCGCATCGATGAGG
AGATAAAGGAGCGGGAGATGGGACGGTTTCTTTCCGGAGAACTTGATATCCTTGTTGCAACCAGCGTCGTCGAGGTCGGC
GTTGACGCCCCCAATGCCAGCTGCATGGTGATCGAACATGCGGAACAATTCGGGCTTTCGGCCCTGCATCAGCTCAGAGG
ACGGGTGGGTCGGAGCGACCGCCAATCCTATTGTTTCCTCGTTTTTTCCGAGGGTTTGACGGAAACGGGCAAGCAGCGGC
TTCGCATCATGAAGGAAAACAACGACGGATTTGTCATTGCCGAGGAAGATCTAAAGCTTCGAGGGCCGGGAGAGCTCTCG
GGGATGAGGCAGGCGGGGGTTCTGAATCTTCAGTTTGCCGACCTACTCAAAGATGGGGAGATCCTCGAAGCAAGCAGAAA
GGAGGCGACGGCTATTGTTTCGGGCGATTTCGAACTTGAACACGCCGATCATCAGGTTCTGAAGCGGCTCTACACCGTCG
CCCCTCCCTTTGATGATCTTGTCTCAATCGCCTCCGAAGGGTAG

Protein sequence :
MFLGELRKPVTVLHGVGKKSTERLARLGVRHIADLLRLLPRQWEDRSRLVPIVRAGDARPALTVVEIVAHDWFGKPHNQT
LKVFVQDETSVAVLLCFNRNFLAGKLPVGARILLYAPLQHRFGELQAASFDFVPAGKYPLTREEDYLSEVPKISGRGGIG
SILPVYPLTEGLTQGALRDLMQQAMEGFGKFVDDELPEAIRRDHGLPHLAEALVMIHRPRRIEEPEEGRKALAFNELFHL
QCAVTRRGALRKRKERPSLALETGLVDRCIRDLPFSLTADQKQAVEEIIEDLKRPYPMARLLQGDVGSGKTLTALLSALP
IIEAGYQVAFMAPTELLARQHAENSARILAPLGVRIALFTGSIPSPARKELLVALQEGEIDLVVGTHTLFSSSVRFRRLR
YCIIDEQHKFGVMQRQGLLDKGEFPDLLTMTATPIPRTMALTAFGDLAVSVIRTMPPGRKPIITHLAKVENRPKVYAAVE
KELERGGQAYFVYPLIEEGSREKIDSAESMYRLLREEVFPQRRIALLHSRIDEEIKEREMGRFLSGELDILVATSVVEVG
VDAPNASCMVIEHAEQFGLSALHQLRGRVGRSDRQSYCFLVFSEGLTETGKQRLRIMKENNDGFVIAEEDLKLRGPGELS
GMRQAGVLNLQFADLLKDGEILEASRKEATAIVSGDFELEHADHQVLKRLYTVAPPFDDLVSIASEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-87 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spirs_1325 YP_003803046.1 ATP-dependent DNA helicase RecG BAC0356 Protein 4e-77 41