Gene Information

Name : Spirs_0998 (Spirs_0998)
Accession : YP_003802726.1
Strain : Spirochaeta smaragdinae DSM 11293
Genome accession: NC_014364
Putative virulence/resistance : Unknown
Product : hexulose-6-phosphate isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : 5.1.3.22
Position : 1044557 - 1045414 bp
Length : 858 bp
Strand : +
Note : COGs: COG3623 L-xylulose-5-phosphate 3-epimerase; InterPro IPR000408:IPR012307:IPR004560; KEGG: cpf:CPF_0649 L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase domain protein TIM barrel; PRIAM: L-ribulose-5-phosphate 3-epimerase; SPTR: uncharacter

DNA sequence :
GTGGAACGATACACGCTAGGACTCTACGAAAAAAGCATGCCATCGAGCCTGTCGCTGGCCGAGAAGTTAACCGTGGCGAG
CGAGGCCTCATATGACTACATTGAGTTGTCCATTGACGAGACCGATGAAAAGTTGAATCGGCTTTCCTGGGATCATTCCG
AACGGAAGGGGCTTTTGGATGCCATGGACTCCATAGGCATACGTATCCGGTCAATTTGCCTAAGCGGTCACCGCAAATAT
CCCCTGGGGCATCCCGACTTCGCAGTGCGTCAACGCAGCATGGCCATCATGTGCGATGCCATATGTCTCGCTTCGGATTT
GGGAATTCGACTCATTCAGATAGCCGGTTATGATGTTTATTATGTGCCCTCCTCCGAAGAAAGCAAAAAACGTTTCGCCG
AGAATATCGCCATCGCTGTAGAGGTTGCTGCGAGGGAAGGAGTCATCCTCGCCTTCGAGACCATGGAGACCCCCTTCATG
GATACGACGGCGAAGGCTATGCACTGGGTACATGAGATGGACTCGCCATACCTTCAGGTCTATCCTGATACAGGCAACGT
TACGAATGCTGCCGCGCTCTATGGAACAACCCTGGAGGCGGACCTGGGCACCGGACACGGGCATTTGGCTGCCTTGCATC
TCAAAGAGTCCAATCCTGGTGTATATCGTGAGGTGCCTTACGGCCATGGCCACGTCGATTTTAAGGAGGCGACCAAGGTT
GCCCTCTCCCTTGGAGTGCGCATGTTCGTGGGCGAATTCTGGTACACCGGTGAGGAAGACTGGAGGAACTTACTCAAGGA
GAATGGGCTTTTCCTTAGGTCAGCGTTGAAAGAAGGGGAGAAGGCTCTCGGACTTTAA

Protein sequence :
MERYTLGLYEKSMPSSLSLAEKLTVASEASYDYIELSIDETDEKLNRLSWDHSERKGLLDAMDSIGIRIRSICLSGHRKY
PLGHPDFAVRQRSMAIMCDAICLASDLGIRLIQIAGYDVYYVPSSEESKKRFAENIAIAVEVAAREGVILAFETMETPFM
DTTAKAMHWVHEMDSPYLQVYPDTGNVTNAAALYGTTLEADLGTGHGHLAALHLKESNPGVYREVPYGHGHVDFKEATKV
ALSLGVRMFVGEFWYTGEEDWRNLLKENGLFLRSALKEGEKALGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 6e-40 43