Gene Information

Name : Spirs_0996 (Spirs_0996)
Accession : YP_003802724.1
Strain : Spirochaeta smaragdinae DSM 11293
Genome accession: NC_014364
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 1042834 - 1043532 bp
Length : 699 bp
Strand : +
Note : COGs: COG0235 ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303:IPR004661; KEGG: gyc:GYMC61_2736 L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; SPTR: uncharacterized protein; TIGRF

DNA sequence :
GTGTTAGAAGATCTTAAACGCGCCGTATGGGAAGCCAATATCGAGCTTCCCCGGCATGGGCTCGTGACCTTTACCTGGGG
TAACGTCTCGGGCATAGACCGCGATCGCGGGTTGATTGTGATAAAGCCTTCCGGAGTGGAGTACGCCGACATGAAGAGCG
AGGATATGGTTGTCGTCGACATGGAAGGAACATGTGTCGAAGAAAAGCTGAATCCGTCATCCGATACGCCGACGCATGTC
GAGCTCTACAAGGCTTTTCCTGACATTGGCGGAATCGTCCATACCCATAGTCGCTGGGCCACCATTTTCGCCCAGGCTGG
CAGGGGAATTCCGGCCCTGGGAACGACGCATGCCGATTACTTTTACGGGGAAATACCCTGCACGCGGCCCATGACGAAGC
AAGAGATAGCCGAAGCCTACGAAAAGGAGACGGGATCCGTTATCATCGAGCGCTTCAAGAGGCTGAAACCGAATTCTATC
CCCGGTGTGGTCGTGTATGGCCACGGGCCCTTCGCCTGGGGAGATAGTCCCCTGGAGGCAGTGCACAACGCCGTCGTCAT
GGAGGAGGCCGCCATGATGGCCTGGCACTGTATCACCCTATCCGGCAGCATCGAGCCTATATCGCAGGATCTTCTGGATA
AGCACTTCCTCCGTAAACACGGCGCAAACGCTTATTACGGCCAGTCAGGTACGAGGTAA

Protein sequence :
MLEDLKRAVWEANIELPRHGLVTFTWGNVSGIDRDRGLIVIKPSGVEYADMKSEDMVVVDMEGTCVEEKLNPSSDTPTHV
ELYKAFPDIGGIVHTHSRWATIFAQAGRGIPALGTTHADYFYGEIPCTRPMTKQEIAEAYEKETGSVIIERFKRLKPNSI
PGVVVYGHGPFAWGDSPLEAVHNAVVMEEAAMMAWHCITLSGSIEPISQDLLDKHFLRKHGANAYYGQSGTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 1e-53 57