Gene Information

Name : Olsu_0083 (Olsu_0083)
Accession : YP_003800097.1
Strain : Olsenella uli DSM 7084
Genome accession: NC_014363
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 97271 - 99922 bp
Length : 2652 bp
Strand : +
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR017730:IPR003593:IPR001270:IPR018368:IPR 004176:IPR003959:IPR013093:IPR019489; KEGG: apv:Apar_0100 ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase cen

DNA sequence :
ATGAGGTTCGACAAGTGGGCGGTGACCGCCCAGGAGGCGCTGCAGTCCTCCCTCACAATCGCGGCTGACGCCGAGGCGGG
CCAGGTGAAGCCCATCCATCTGTTGAAGGCCCTGCTCTCTTCGGACGAGCGCAACCTGCGTGCCATCATCGAGCGCGTGG
GGGCTGACCCTGCACAGGTGGAGACCCAGGTCGATCAGGCCATCGCAGGTCAGCCGCGCGTTACGGGTGACATGAGCCAG
ATGGGCATCTCGACCGAGCTCACGCGCGTGGGCGATGCGGCGGAGAAGCTCGCTGGCAAGATGGGGGATTCCTATGTCAC
GAGCGAGCATCTCCTCTGCGCATTGGCAGACGAGCGCGGCGAGGCGGGCAACGCCCTCAGGGCGTCGGGCGTCACGAGCA
AGCGCGTGCAGGAGGCTTACGACGACCTGCGCGGCGACGAGCGCGTGACCTCGCAGGATCAGAAGGCGCAGTTCGAGGCG
CTCGAACAGTATGGCAGGAACGTCACCGACCTGGCACGCCAGGGCAAGCTCGACCCGGTCATCGGCCGCGTCGAGGAGAT
TCGCCGCACCATCCAGGTGCTCTCCCGCCGTACCAAGAACAACCCCGTGCTCATCGGCGAGCCCGGCGTGGGCAAGACCG
CCATCGTCGAGGGCCTGGCCGAGCGCATCGTTGCCGGGGACGTCCCCTCCACGATCAGGGACAAGGACATCGTCGAGTTG
GACATGAGCGCGCTGGTGGCCGGCGCCAAGTACAGGGGCGAGTTCGAGGATCGCCTGAAGAGCGTGCTCAAGGAGGTCGA
GAAGTCCGCCGGTCGCATCATCCTGTTCATCGACGAGCTGCACACCATCGTGGGGGCGGGTGCGACCGAAGGCTCCATGG
ATGCAGGGAACATCCTGAAGCCGGCCCTGGCCCGTGGCGAACTCCATGCCATCGGCGCCACCACGTTGGACGAGTACCGC
AAGTACATCGAGAAAGACCAGGCCCTGGCCCGTCGCTTCCAGACCGTCCTGGTCTCGGAGCCCACGGTCGAGGACACGAT
CAGCATCCTGCGTGGCCTGAAGGAGAAGTACGAGCAGCACCATCGCGTCCGCATCACCGACGCGGCGCTCGTCTCGGCCG
CAGACCTCTCGAACCGCTACATCAGCGAGCGCTTCCTGCCCGACAAGGCGATCGACCTGGTGGACGAGGCCGCCTCGCGC
CTGCGTATGGAGCTTGACTCCATGCCGTCCGAGATCGATGCCGTCGACCGCCAGCTGACCCAGATGCAGATCGAGGAGCA
GGCCCTCATGAAGGAGGAGGACGCTGCCAGCCGCGAGCGCCTGGAGGTGCTGCGCGGCGAGATCGCCACCACGCGCGAGA
AGCTCGATAGCATGAAGGCCGACTGGCAGAACGAGAAGGGTGCCGTCGACCGGGTGCAGGACCTCAAGTCCAAGATCGAG
GAGGCAAGGTCTGAGGTCGACCGTGCCATCCGCGACGGGAACCTGGCCCACGCCTCCGAGCTGCGCTATGGGACCATCCC
CCAACTGCAGCGCGAGTACGACGAGGCCGAGGCGGTGCTCTCGGCCAAGCAGGAGGCCGGCGGCATCCTCAAGGAGGAGG
TCACGACCGAGGAGATCGCCGAGGTGGTCTCCTCGTGGACGGGCGTGCCGGTCTCCAAGATGATGCAGGGGGAGATGGAC
AAGCTCAAGAACCTCGAAGCCGAGCTGCACAAGCGCGTCATCGGTCAGAACGAGGCCGTCGAGGCCGTGGCGGCGGCGGT
GCGTCGCAGCCGCGCGGGACTCTCTGACCCCAATCGCCCGCTGGGCAGCTTCTTCTTCCTGGGGCCGACCGGCGTGGGCA
AGACCGAGCTGGCAAAGGCGCTCGCGGCCTGTCTCTTCGACGACGAGAAGGCGCTGGTCCGCATCGACATGTCCGAGTAC
ATGGAGAAGTTCAGCGTCCAGAGGCTCATCGGCGCGCCTCCCGGATACGTGGGATACGACGAGGGTGGCCAGCTGACCGA
GGCCGTGCGTCGGCACCCGTACTGCGTCATCCTGCTGGACGAGATGGAGAAGGCGCATCCCGACGTCTTCAACATCCTGC
TGCAGGTGCTGGATGACGGTCGCCTGACCGACGGCCAGGGCCGCGTGGTGAGCTTCAAGAACACGATCGTCATCATGACC
AGCAACGTGGGCAGCCAGTTCATCGCGGGGGCCAATGCGTCGAGCGATCCGGCCACGGTCCAGAAGCAGGTCAACGACGC
ACTGCGCGCAACGTTCAAGCCGGAGTTCCTCAACCGCATCGACGACGTGGTGGTCTTTCATGCCCTGGGGCTGGACGACA
TCGAGAAGATCGTGGACATCCAGCTGGCAGACGTCCGCAAGCGCCTGGCCAAGGAGCGCATCAGGCTCGAGCTCTCCGAC
GCTGCCATCCAGGCGCTGTCGCTCGACGGCCTCGACCCGGTCTTTGGCGCGCGTCCGCTCAAGCGCCTGATCCAGCGCCA
GGTCGTGGACAACGTCGCAGGCCTGATCATTGACGGTCAGCTCCACGAGGGCGATACCGTGCGCGTGGACGTGGGTGCGG
GCGACCGCCTGGTCGCCGTGCGTGCGGTCGGACCCGTGCCCGCCACCCAGCCGGCTGATGACGCCCCCGTCGAGCCCGAC
GCCCTGGAGTAA

Protein sequence :
MRFDKWAVTAQEALQSSLTIAADAEAGQVKPIHLLKALLSSDERNLRAIIERVGADPAQVETQVDQAIAGQPRVTGDMSQ
MGISTELTRVGDAAEKLAGKMGDSYVTSEHLLCALADERGEAGNALRASGVTSKRVQEAYDDLRGDERVTSQDQKAQFEA
LEQYGRNVTDLARQGKLDPVIGRVEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAERIVAGDVPSTIRDKDIVEL
DMSALVAGAKYRGEFEDRLKSVLKEVEKSAGRIILFIDELHTIVGAGATEGSMDAGNILKPALARGELHAIGATTLDEYR
KYIEKDQALARRFQTVLVSEPTVEDTISILRGLKEKYEQHHRVRITDAALVSAADLSNRYISERFLPDKAIDLVDEAASR
LRMELDSMPSEIDAVDRQLTQMQIEEQALMKEEDAASRERLEVLRGEIATTREKLDSMKADWQNEKGAVDRVQDLKSKIE
EARSEVDRAIRDGNLAHASELRYGTIPQLQREYDEAEAVLSAKQEAGGILKEEVTTEEIAEVVSSWTGVPVSKMMQGEMD
KLKNLEAELHKRVIGQNEAVEAVAAAVRRSRAGLSDPNRPLGSFFFLGPTGVGKTELAKALAACLFDDEKALVRIDMSEY
MEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRHPYCVILLDEMEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNTIVIMT
SNVGSQFIAGANASSDPATVQKQVNDALRATFKPEFLNRIDDVVVFHALGLDDIEKIVDIQLADVRKRLAKERIRLELSD
AAIQALSLDGLDPVFGARPLKRLIQRQVVDNVAGLIIDGQLHEGDTVRVDVGAGDRLVAVRAVGPVPATQPADDAPVEPD
ALE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-102 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-102 43
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-102 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Olsu_0083 YP_003800097.1 ATP-dependent chaperone ClpB VFG2084 Protein 9e-109 43