Gene Information

Name : Olsu_0243 (Olsu_0243)
Accession : YP_003800251.1
Strain : Olsenella uli DSM 7084
Genome accession: NC_014363
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 283770 - 284825 bp
Length : 1056 bp
Strand : -
Note : COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006128:IPR006129:IPR006127; KEGG: apv:Apar_0282 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: B9CMJ4 Periplasmic che

DNA sequence : 
ATGGATATCGGACAGAAAGGTCCTGGCATGCCTATGATCTCCAAGCACACGTCCCCGATCACCTCCGGTCGATCTGGCCT
TACCCCGCCTGCCCTCTACACGCGCCGCAGTGCCCTCGGTCTGTTCGCAGGGGCTGCACTCGTCGGGCTCGGTGCCTGCT
CGAAAATGGGAGCGAAGACGGGCTCCATGGATGAGGGGGCCTCCTCCGATGCGGACTCGAAGCCGTTTGTTCTGACCACC
TTCACCGTCACCCGCGATATCGCGGCAAATGTGGCCGGCGATTTCCTCGACGTCCGTTCCATCACCAAGGCCGGTGCCGA
GATCCATGATTACGAGCCGACTCCCGAGGACATCAAGCAGGCCGAGGGGGCAGCGCTCATCCTGAACAACGGCCTGGGGC
TTGAACGCTGGTTCGAGCGCTTCGCCACCGATTCGCATGCCGAGCGCGTCGATCTGAGCAAAGGGGTCGATCCCATCTCC
ATCTCAGAGGGCGACTTCGCTGGGGAGGCGAACCCGCATGCGTGGATGTCCCCGAAAAACGGGCAGATCTACGTCGACAA
CATGGTTGCCGCATTCAGCAGGCTCGACCCAGACCACGCCTCCGACTACGAGAGCAACGGCAAGTCCTACAAGGAGAGTC
TCGAGAAGATTTCCTCCGAGCTCATCCAGCGCCTCGATGAGCTTCCCACGGACCAGCGTACGCTTGTGACCTGCGAGGGG
GCTTTTTCCTATCTCTGCCGTGACGCAAACCTGGACGAGATCTACCTGTGGCCCGTCAACTCCGCGGAAGAGGGGACGCC
ACAGCAGATCGCGAAGGTGGTGCAGGCGGTCAGAGACAAGAGCATCCCGGCCGTCTTTTGCGAGTCGACTGTCAGCCCCA
AGGCGATGCGGCAGGTAGCCGACGAGACTGGCGCCTCTTTGAGAGCGGATGCCGAGCACATGCTCTACGTCGACTCGCTT
TCCGATGGGGACGGCCCAGTACCCACCTATCTCGAGCTGCTCTCTCACGATGCCAAGGTCATCGTCGAGGGCCTGACGGG
AAAGGAGTCGAAATGA

Protein sequence : 
MDIGQKGPGMPMISKHTSPITSGRSGLTPPALYTRRSALGLFAGAALVGLGACSKMGAKTGSMDEGASSDADSKPFVLTT
FTVTRDIAANVAGDFLDVRSITKAGAEIHDYEPTPEDIKQAEGAALILNNGLGLERWFERFATDSHAERVDLSKGVDPIS
ISEGDFAGEANPHAWMSPKNGQIYVDNMVAAFSRLDPDHASDYESNGKSYKESLEKISSELIQRLDELPTDQRTLVTCEG
AFSYLCRDANLDEIYLWPVNSAEEGTPQQIAKVVQAVRDKSIPAVFCESTVSPKAMRQVADETGASLRADAEHMLYVDSL
SDGDGPVPTYLELLSHDAKVIVEGLTGKESK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-61 54
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 4e-61 54
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 4e-61 54
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 4e-61 54
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-61 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Olsu_0243 YP_003800251.1 periplasmic solute binding protein BAC0349 Protein 2e-61 54
Olsu_0243 YP_003800251.1 periplasmic solute binding protein BAC0439 Protein 2e-58 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Olsu_0243 YP_003800251.1 periplasmic solute binding protein VFG0525 Protein 2e-61 54