Gene Information

Name : Olsu_0242 (Olsu_0242)
Accession : YP_003800250.1
Strain : Olsenella uli DSM 7084
Genome accession: NC_014363
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 282976 - 283773 bp
Length : 798 bp
Strand : -
Note : COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: apv:Apar_0281 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B9CMJ3 Chelated iron transport system membrane pr

DNA sequence : 
ATGAGCGTCAGCGACGTCGCATGCCCTGATATCTCCGCCGGCCTCTCGGTAAGTGGCCTCTCGGCGTGGTACGGAAGCTC
CCAGGTGCTCCACGACGTGTCCTTCACCCTTTCGCGCGGAGATCTGTGCGCGCTTGTCGGCGTCAACGGAGCGGGGAAGT
CGACCCTGTTCAAGGCCATCATGGGCATGGTGCACTCCCAGGGCATCTGCTCGTTTGCGGGCGAGGGCCTGCCTGTTGCG
CGCAAGGCGGGACTCGTGGGCTACGTTCCCCAGTCGGAGGACATCGACGTGATGTTCCCGCTGCGCGTCCGCGACGTCGT
CATGATGGGACGCTATTGCCACCTTGGCTTCACGCGCCGCCCCTCGAAGCATGATCGGGACACCGTAGAGGACGCGCTCG
GGCGTGTAGGGCTCTCCGATCTCGCCGACCGTCCCCTCTCCCAGCTTTCTGGTGGACAGCGCAAACGGGTGTTCGTCGCA
CGGGGCATCGCCCAGCAGGCCAGGCTCATGCTGCTCGACGAACCGTTCGCCGGCGTGGACAAGCGCTCGGAGGGCATCAT
CTGCGACCTACTCGCCAGCTTGGCCTCCGAGGGCGCGATCATCCTGGTCGCCATCCACGACCTGCGCATGGCACGCGAGT
TCTTCGATCGCTGCCTGGCGATTGACGGCACCATCATCGCGCAGGGATCCGCAAAGGAGGTCCTCGGCGACCGCAACCTG
CTTGAATCCTTCGGCCTATCGGAGGCCGGCATCGGCACCGCGGCACACATGGTTCCAATAGAGACGGGAGCTGCGTGA

Protein sequence : 
MSVSDVACPDISAGLSVSGLSAWYGSSQVLHDVSFTLSRGDLCALVGVNGAGKSTLFKAIMGMVHSQGICSFAGEGLPVA
RKAGLVGYVPQSEDIDVMFPLRVRDVVMMGRYCHLGFTRRPSKHDRDTVEDALGRVGLSDLADRPLSQLSGGQRKRVFVA
RGIAQQARLMLLDEPFAGVDKRSEGIICDLLASLASEGAIILVAIHDLRMAREFFDRCLAIDGTIIAQGSAKEVLGDRNL
LESFGLSEAGIGTAAHMVPIETGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-45 46
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-45 46
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-46 46
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-46 46
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-46 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Olsu_0242 YP_003800250.1 ABC transporter BAC0350 Protein 7e-47 46
Olsu_0242 YP_003800250.1 ABC transporter BAC0440 Protein 6e-50 46
Olsu_0242 YP_003800250.1 ABC transporter BAC0400 Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Olsu_0242 YP_003800250.1 ABC transporter VFG0526 Protein 7e-47 46