Gene Information

Name : Olsu_1638 (Olsu_1638)
Accession : YP_003801616.1
Strain : Olsenella uli DSM 7084
Genome accession: NC_014363
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : 6.1.1.6
Position : 1872092 - 1874185 bp
Length : 2094 bp
Strand : -
Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR004365:IPR004364:IPR002547:IPR016027:IPR 012340:IPR002313:IPR006195:IPR018149:IPR002345; KEGG: ele:Elen_2238 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding

DNA sequence :
ATGGCCGACCAGAGCATCGCCCCCGAGACCGACATCAACGACGAGCGGTCCGTCCGCCGCGCCAAGCGCCAGGCGCTGAT
CGACGCAGGCGTGAACCCATACCCCACCAAGAGCGACATTACCGCCCACGCAGCCGAACTGGCGGAACGCTATGCCAGCC
TGGAGGATGGCGCGGACACCACGGATGAGTACTCCCTGGCCGGCCGCATCCGTGCGTACCGCCGACAGGGTAAGGCCCGC
TTCCTCGTCATCGAGGACGTCTCGGGTGAGATCCAGCTGTTCTGTCGCGTCAACAACCTCAGCGCAGAGGACTGGGGCCT
TCTCGGCCAGCTTGACCTGGGCGACATCATTCAGGCGCGCGGCACCGTCCTGCGTACGCGTCGCGGCCAGCTCTCGGTCT
CGCCCACGAGCGTCACGCTGCTCTCCAAGTCCGTGCGGCCGCTGCCGGAGAAGTTCCATGGCCTCACGGACCGCGAGCTG
CGCTACCGCCAGCGCTACGTCGACCTCATCATGAACCGTGACGTGCGTGACACCTTCCGCATGCGCAGTGCCATCGTGAG
CCAGATTCGCCGTTACATGGAGTCTGACGGCTATATCGAGGTCGAGACCCCCATGATGCACGCCATCCTGGGTGGTGCCA
ACGCGCGCCCGTTCGTGACGCACTTCAATGCCCTCGACCGCAACTTCTACCTGCGCATCGCCACCGAGCTTCCGCTCAAG
CGCCTCATCGTGGGAGGCATGGAGCGCGTCTTCGAGATCGGCCGCCAGTTCCGCAACGAGGGCATGGACCTCACCCACAA
TCCCGAGTTCACCTCGATGGAGGCCTACTGCGCCTACTCGGACCTGCAGGGCATGAAGGACCTCACCATGGGGCTCTTCA
AGGCCATCGCCCGCGAGGCCTGCGGTTGCGAGGAGGGCCACGAGGCCATCGTCTACCAGGGCCAGGAGATAGACCTCTCC
GGCACCTGGCGCTCTGCCACCGTGGCCGAGATCGCCTCGGAGGTTTGCGGCGAGGAGCTCACGATCGACACGCCCCTCGA
CCACCTGCGCGAACTCTGTGCCGCACATAGCATCGAATGGCGGGAGAACTGGGGCGCCGGCAAGCTCCTGTTCGAGCTCT
ACGACGAGCTGGGCGAGGAGACCCTGGTGAACCCCACCTTCGTGTGCGACTATCCCGAGGAGGTCAGCCCACTGGCCAAG
CGCAAGGACGACGACCCCTGCATCACGGACCGCTTCGAGCTGGTCATTGCCGGCCATGAGTACGCCAACGCGTTCTCCGA
GCTCAACGATCCCGTCGACCAGGCCGGCCGCTTTGCCGAGCAGGTGGCGGCCAAGGGCTTCGGCGACGACGAGGCCATGG
GCTACGACTACGACTACGTCCGTGCGCTTGAGTACGGCATGCCGCCTGCAGGTGGCATCGGCTTTGGCATCGACCGCATG
GTGATGCTGTTCTGCGACCAGCCCGCCATCCGCGACGTGCTGCTGTTCCCGCAGATGAAGCCCGAGGCCGTCACGCGCGA
GCAGATTGCCGCCCAGGTCACGGGTGCGCGCACGGACGGTGCGGCAGCCAACATCGACGCGCTGCTCTCCGACGCGGGGA
CGGGTGTGGGCCCTGGGGCCGTGCGGGCTGACGACGATGGGGGAGTCGCCGCGACCGCCGGGCCCACGGACGTCGGGCCC
GAGCCCCCCGTCGTGTCGGTGCCGGGGCCTGCGGGGTCAGTCGTAGAGGGGGACGTCACGATTGAGCCCATCGCCACCGA
CGTCAGCTTCGACGATTTCTCCCGGTCGGACATGCGCGTCGTGCGCGTGCGGGAGTGCGTCGCGGTCCCCAAGAGCAAGA
AGCTCCTGCGGTTCACGCTCGACGACGGTACGGGGGAGGAGCGCACGATCCTCTCGGGCATTCACGCCTACTACGAGCCG
GAGGAGCTTGTGGGAAAGAACCTCGTGGCGATCACGAACATCCCGCCGCGCAGGATGATGGGCGTCGACTCCTGCGGCAT
GCTCCTGTCGGCCATCCATGAGGTCAAGGGAGAGGAGCGTCTCGACCTCCTGATGGTGGACGACGCCATCCCGGCAGGAT
CGAAGCTGTACTAG

Protein sequence :
MADQSIAPETDINDERSVRRAKRQALIDAGVNPYPTKSDITAHAAELAERYASLEDGADTTDEYSLAGRIRAYRRQGKAR
FLVIEDVSGEIQLFCRVNNLSAEDWGLLGQLDLGDIIQARGTVLRTRRGQLSVSPTSVTLLSKSVRPLPEKFHGLTDREL
RYRQRYVDLIMNRDVRDTFRMRSAIVSQIRRYMESDGYIEVETPMMHAILGGANARPFVTHFNALDRNFYLRIATELPLK
RLIVGGMERVFEIGRQFRNEGMDLTHNPEFTSMEAYCAYSDLQGMKDLTMGLFKAIAREACGCEEGHEAIVYQGQEIDLS
GTWRSATVAEIASEVCGEELTIDTPLDHLRELCAAHSIEWRENWGAGKLLFELYDELGEETLVNPTFVCDYPEEVSPLAK
RKDDDPCITDRFELVIAGHEYANAFSELNDPVDQAGRFAEQVAAKGFGDDEAMGYDYDYVRALEYGMPPAGGIGFGIDRM
VMLFCDQPAIRDVLLFPQMKPEAVTREQIAAQVTGARTDGAAANIDALLSDAGTGVGPGAVRADDDGGVAATAGPTDVGP
EPPVVSVPGPAGSVVEGDVTIEPIATDVSFDDFSRSDMRVVRVRECVAVPKSKKLLRFTLDDGTGEERTILSGIHAYYEP
EELVGKNLVAITNIPPRRMMGVDSCGMLLSAIHEVKGEERLDLLMVDDAIPAGSKLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-95 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Olsu_1638 YP_003801616.1 lysyl-tRNA synthetase VFG1668 Protein 2e-95 47