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Name : smpB (NIDE0007) Accession : YP_003795723.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Unknown Product : ssrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 9078 - 9557 bp Length : 480 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10393194, 11724528, 11927568, 12904796; Product type f : factor DNA sequence : ATGACGAAAACGCACGACACAGAAGACCAGTACAAAGTCGTCGCCACCAATCGGAAGGCGTATCACGACTACTTCATCGA AGAGAAGTTCGAGGCCGGGGTCATCCTGCGGGGGACTGAGGTGAAGTCGTTGCGGGAAGGTCGCGTGAACCTCCAGGATA GTTATGCTTCGGTGGACGACGGCGAGGTCTATCTGCAGCATTGTCACATCAGCCCCTACTCGCACGGCAATTTGATGAAT CACGACCCGCTCCGCAAGCGAAAGCTGTTGTTGCATCGCAAAGAGATCAACAAGCTGATCGGGAAAACCCAGCTGAAGGG TCTGACGCTCGTCCCCCTGCGCATCTACTTTTCGAAGCGCGGCCACGCCAAAGTGGAACTAGCCCTGGCGAAGGGCAAGA AACAATACGATCGCCGGGAATCGATCAAAGCCCGCGAAGCCGGCCGAGAAGTCGAGCGCGCGATCAAGCAAAGAAAATAG Protein sequence : MTKTHDTEDQYKVVATNRKAYHDYFIEEKFEAGVILRGTEVKSLREGRVNLQDSYASVDDGEVYLQHCHISPYSHGNLMN HDPLRKRKLLLHRKEINKLIGKTQLKGLTLVPLRIYFSKRGHAKVELALAKGKKQYDRRESIKAREAGREVERAIKQRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 4e-27 | 56 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-27 | 55 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 6e-21 | 42 |
