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Name : lpsL (NIDE4172) Accession : YP_003799765.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Virulence Product : UDP-glucuronate 5'-epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : 5.1.3.12 Position : 4120748 - 4121770 bp Length : 1023 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 11706991, 7961465, 9765575; Product type e : enzyme DNA sequence : ATGGGGTCTGGGAAAGGATTAGTGCTCGTCACCGGCGCCGCCGGATTTATCGGGTCTCATGTGAGCCGGCGATTGCTCGA TCGTGGCGACACCGTGCTCGGTCTGGACAATCTGAATGACTACTACGATGTGCGCCTCAAAGAAGCGCGGCTCGCACGCC TGAAGTCTCATCCCCAATTTCAGTTCGTCAAACTGGATCTGTCCGATCGTGCGGGGATGGCGGCGCTTTTTGAGCAGCAT GCCATTCGGCGCGTCGTGCATCTGGCGGCGCAGGCCGGCGTCCGGTACTCCCTGGTCAATCCGCACGCCTACACCGCCAG TAACGTCGATGGGTTCCTGAACATTCTCGAAGGTTGTCGGCATCACAAGGCCGAGCACTTGGTCTATGCCTCCACGAGTT CGGTGTACGGCGGCCACACGAAGATGCCGTTCTCGGTGCACGACAATGTCGATCACCCCGTATCGCTCTACGCCGCGACC AAGAAGGCGAACGAGCTCATGGCGCATTGTTACGCGCATCTCTATCGATTCCCGATTACGGGATTGCGGTTCTTTACCGT CTACGGGCCCTGGGGCCGTCCGGATATGGCGTTGTTTCTCTTTACGAAGGCGATTCTGGAAGGCAAGCCCATCGACGTGT TCAATCACGGGAAGATGCAGCGGGACTTTACCTATGTCGATGATATCGCCGAAGGCGTATTGCGCACGCTCGATCGTCCT GCGCAGGCTGATCCGGCCTGGGCGAGCGACAACCCCGACCCCGGCAGCAGCTCCGCTCCCTATCGACTGTACAACATCGG CAATCACCAACCGGTCGAGTTGTTGCGATTTATCGAGGTGCTGGAACAGACGCTGGGCATGAAAGCCCAAAAGAACTTCC TTCCTCTCCAGGCCGGCGACGTGCCTGCGACCTATGCCGATGTCGCGGATCTCATGCGCGATACGGGCTTCAAGCCTGCG ACCTCTATCGAGACCGGCATCGCCCGCTTCGTAGAATGGTATCGGGAGTACTACAAGGCGTGA Protein sequence : MGSGKGLVLVTGAAGFIGSHVSRRLLDRGDTVLGLDNLNDYYDVRLKEARLARLKSHPQFQFVKLDLSDRAGMAALFEQH AIRRVVHLAAQAGVRYSLVNPHAYTASNVDGFLNILEGCRHHKAEHLVYASTSSVYGGHTKMPFSVHDNVDHPVSLYAAT KKANELMAHCYAHLYRFPITGLRFFTVYGPWGRPDMALFLFTKAILEGKPIDVFNHGKMQRDFTYVDDIAEGVLRTLDRP AQADPAWASDNPDPGSSSAPYRLYNIGNHQPVELLRFIEVLEQTLGMKAQKNFLPLQAGDVPATYADVADLMRDTGFKPA TSIETGIARFVEWYREYYKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 9e-102 | 58 |
