Gene Information

Name : NIDE3762 (NIDE3762)
Accession : YP_003799363.1
Strain : Candidatus Nitrospira defluvii
Genome accession: NC_014355
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3747020 - 3747724 bp
Length : 705 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 10384240, 10384243, 2152901, 8696976, 9180700; Product type h : extrachromosomal origin

DNA sequence :
TTGACGGTAATCGGCCTGAGTGCCAGCAGCTTGCGATACCGCCCCGCGCCGGACCGGAATGCCGATCTACGACAGACCAT
TGTCGCACTCGCGCATGGCCATCGGCGGTACGGGGCCGGCATGATTTATCTGAAGGTGCGTCAGCAGGGTAGACTGGTGA
ATCACAAGCGGATTGAACGGCTCTATGCCGAAGCCCAGTTGCAGGTGCGGCGCCGCACCCGCAAGAAGGTGCCGGGAGGC
GAGCGTCTGCCACTGGTAAGGTCTGCGGACGCGAACCACGTCTGGTCCATGGATTTCGTATTTCACCACAGTGCGGAAGG
CCGGCCATACGTCACGTGGATACTCGATCACTTGGCCGCGACCCGCGGCTTGCCCCAGGTGATTCGAACCGACAATGGCA
AAGAGTTTTGTGGGCGCACCATCCTGACATGGACCCACGCGCACACCGTGACGCTACGCCTGATCGAACCGGACAAGCCC
AATCAAAATTCCTACATCGAGTCATTCAACGGGCGCTTGCGTGATGAGTGCCTGAACGAGCATTGGTTCCTGACCCTCGC
GCATGCCCAAGTCGTCATTGAAGCGTGGCGGCGCGAATACAACGAGGAGCGTCCGAAAAAAGCATTGGGGGGACTGACAC
CTGCCGCTTATGCCAGGCGTTTGGTGAGAAAATCGGTTACAGTCGCACCCGGTCTCCAAACGTAG

Protein sequence :
MTVIGLSASSLRYRPAPDRNADLRQTIVALAHGHRRYGAGMIYLKVRQQGRLVNHKRIERLYAEAQLQVRRRTRKKVPGG
ERLPLVRSADANHVWSMDFVFHHSAEGRPYVTWILDHLAATRGLPQVIRTDNGKEFCGRTILTWTHAHTVTLRLIEPDKP
NQNSYIESFNGRLRDECLNEHWFLTLAHAQVVIEAWRREYNEERPKKALGGLTPAAYARRLVRKSVTVAPGLQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 2e-36 47
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-44 46
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 4e-22 45