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Name : dnaB (NIDE3441) Accession : YP_003799052.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 3427393 - 3428748 bp Length : 1356 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10404597, 10404598, 10460147, 10651639, 12087164, 12161435, 12408831, 15381422, 7612593; Product type e : enzyme DNA sequence : ATGAAGTCGCTCTCCGCGGTTGATCTCACCTCCCCCAAATTGCCGCCGCAGAACGTCGAGGCCGAACAGTCGGTGCTCGG CGCGATCCTGTTGGATAACACGGCGATGGCCAAGGTGATGGAGCTGCTGACGGACGAGGAGTTTTACCGGACTGCGCATC GCAAGATTTATCAGGCCATGCTGGAGCTGTCCGACCGCGGCGAAGTCATCGATCAGATTACGCTCACGGAATGCTTGAAG GCGCGCTCTGAGCTCGAAGCGGTCGGAGGATCCGCCTATCTAGCCGAGCTCGTTCAGGTGGTGCCGACGGCCGCCAATAT CCGCTATCACAGTAAGATCGTACGGGACAAAGCGCTGCTGCGAGGGCTCATTCAGACCTCGACAGAGGTCGTCACGCGCG GGTACGACGGGACAGTGGCTGTCGATGAGCTGTTGGATTTTGCCGAGCGTTCGGTCTTCAGCCTTGCCCAGGGCAAGCTG GATCGTTCCTTCACGCCGGTCAATCAGATCATCAAGGAAAGTCTCGATGTCGTCGACAAGCTGTCCAAGCGCAAGGAACG TGTCACGGGTGTACCGACAGGCTTTATCGATCTGGACGACCTGACCGCCGGATTGCAGCCGTCGGACTTGATCGTCATTG CCGGCCGCCCGAGTATGGGCAAGACCAGTCTGGCGCTTGGGATGGCGCAGCATGCCGCGCTGCATGCCGGGACCGTCGTC GGCATTTTCAGCCTCGAAATGTCGAAGCCGCAGCTCGTGCTCCGCATGTTGAGTTCCGAGGCTCGCGTCGATTCGCATGC ACTCCGGACCGGTCGGTTGCAAAAGGAAGACTGGTGGCGCCTCGCGGAAGCGGCCGGGAAGCTGGAGCAGGCGCCGATCT ATATCGACGACTCCGGCGCCGTGACGGTGCAGCAGATGCGCGGGAAAGCGAGGCGGCTCAAGGCTGAGCGTGGCCTCGAT CTGTTGATTGTCGACTATCTCCAGCTCATGCAAGGGAAGAGCGACTCCGAGTCACGACAACAGGAAATTTCAGATATCTC CCGTTCCTTAAAGACCCTGGCGAAAGAGCTGAACGTGCCGGTCATCGCGCTATCACAGTTGAGTCGCGCAGTGGAAGCCC GGAAGCCCCCGGTTCCCATGTTGGCCGACCTGCGGGAAAGCGGTGCGATCGAACAGGACGCCGATGTCGTGATGTTTATC TATCGTGAAGAAGTCTACGAACCTGCGACGGAGAGAAAAGGCATCGCCGAAATTCTGGTCAGTAAGCATCGTAACGGACC GATCGGGAAGCGGGACTTATTCTTTCACGACCGGTTTGCCAAGTTCGAGAATCTCGAGAGTCGCGAGGTCGTTTGA Protein sequence : MKSLSAVDLTSPKLPPQNVEAEQSVLGAILLDNTAMAKVMELLTDEEFYRTAHRKIYQAMLELSDRGEVIDQITLTECLK ARSELEAVGGSAYLAELVQVVPTAANIRYHSKIVRDKALLRGLIQTSTEVVTRGYDGTVAVDELLDFAERSVFSLAQGKL DRSFTPVNQIIKESLDVVDKLSKRKERVTGVPTGFIDLDDLTAGLQPSDLIVIAGRPSMGKTSLALGMAQHAALHAGTVV GIFSLEMSKPQLVLRMLSSEARVDSHALRTGRLQKEDWWRLAEAAGKLEQAPIYIDDSGAVTVQQMRGKARRLKAERGLD LLIVDYLQLMQGKSDSESRQQEISDISRSLKTLAKELNVPVIALSQLSRAVEARKPPVPMLADLRESGAIEQDADVVMFI YREEVYEPATERKGIAEILVSKHRNGPIGKRDLFFHDRFAKFENLESREVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-76 | 44 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-68 | 42 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-73 | 42 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 6e-74 | 42 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 4e-68 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 5e-66 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 5e-66 | 42 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-69 | 41 |
