|
Name : tex (NIDE3165) Accession : YP_003798784.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Unknown Product : putative transcriptional accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 3125240 - 3127639 bp Length : 2400 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 10890893, 12408833, 16880543, 7534475, 8458342, 8755871, 9008164; Product type f : factor DNA sequence : ATGAGCTCTTCAACGATCCCGACCATTTCACCCGCAGCCCAACAACGCATCGTCGATCTCATCGCCAAGGAACTTGGCGT GACCGCCCCGCAGATTGCGGCCGCGGTGACGCTGCTGGACGGGGGCGCGACGGTGCCTTTCATCGCCCGTTATCGCAAGG AGGCCACCAGCAATCTGGACGACACGCATTTGCGTTCCCTGGAAGAGCGCCTCCTGTATCTCCGTGAACTGGAGGAGCGG CGGCAGACGATTCTCGCGTCGATCGAAGAGCAGGGGAAATTGACCGACGAACTGCGACGGGCGGTCGAGCAGGCCGCGAC GAAACAAGCGGTGGAAGATATTTACCTGCCCTACAAGCCCAAGCGTCGCACCAAGGCGCAGATTGCGCGCGAAGCCGGAC TGGAGCCCTTGGCCAATGCGCTCCTCGCCGATCCGACGCTCGATCCGGACCAGGAAGCCGCCAAGTATGTGAAGGTGGTG CCCGCGGCGGAAGGTGTGGACGCCATCAATGTGCCCGACGCGAAGACCGCGCTCGAGGGCGCCCGCGATATTCTGGTCGA ACGATTCGCTGAAACCGCCGAGCTGCTTGCGACCTTGCGTGCTAAATTGTGGAATGAAGGCATCGTGACCTCCACGGTCA TGCCGGGCCAAGAAACGGCGGAAGAAGAAAAGTTTCGCGATTACTACGCCTATTCGGAAACTATCCGCACTATTCCCTCG CATCGGGCCCTGGCCATGTTTCGCGGCCGCACGCTGGGTGTGTTGAAGCTCGATCTCGGGTTAGGCGAAAGTCTCGAAGC CGTCGTGCCGCATCCCTGCGCGGCGATGATAGCCGCCCACTTCGGTATTGAGCATCGCGGACGCCGTGCCGACAAATGGT TGACCGATGTCTGTTATTGGGCGTGGCGTGTGAAGGTGCATCTGCATTTGAGCACCGAGCTGTTGCTGCAGGTGCGTGAA GCTGCCGAAGCCGAGGCAATCAAGATTTTCGGACGCAATCTTCATGAGCTCTTATTAGCGGCGCCCGCCGGGCCGAAGGC CGTGCTCGGTCTCGATCCCGGTCTCCGCACCGGCTGCAAAGTGGCGGTCGTGGATGCGACCGGAAAATTGCTGGATACGG CGACGATCTACCCGCATCAACCGCGCAACGACTGGCAGGGGGCCCTGGCGACGATCGTCCAGTTGGTGCTGCGGCATGGT GTCGAATTGATTTCCATCGGCAACGGTACCGCAAGCCGGGAGACCGACAAGTTCGCCGCCGAAGTCGTCAAGCTGGTGGG GGAACAGAAGCCGGAACAGAAACTGGCGAAGATCGTCGTGAGCGAAGCCGGCGCCTCCGTCTATTCGGCCTCGGCGTTTG CTGCGGCGGAGTTTCCAGCGCTGGATGTGAGTCTGCGCGGTGCGGTGTCGATTGCCAGACGGTTGCAGGATCCGTTGGCC GAACTGGTCAAGATCGATCCCAAATCAATCGGCGTCGGCCAGTACCAACACGATGTGAATCAGCGGGCCCTGGCGCGATC GCTCGACGCAACGGTTGAAGACTGCGTGAATGCCGTGGGGGTGGACGTGAACACCGCGTCGGCCCCGTTGCTGGCGAGGG TATCCGGTTTGAATCGGGTGCTGGCGCAAAACATCGTGGAGTATCGTGACACCCACGGTCGGTTCCAGAACCGGCATATG ATCCTCAATGTACCGCGTCTCGGCGAGAAGACGTTCGAGCAGGCGGCGGGGTTTCTGCGAATCAACGACGGCGACAATCC GCTGGATCGTTCCGCCGTCCACCCGGAAGCCTACCCGGTGGTCGAGCGTATGCTGGCGCGCTTGAAGAAAGGCATTGCCG AAGTCATGGGCAAGCCGGCTGTGCTGAAGGAACTCTCCCCGGCGGAATTCACCGACGAAACCTTCGGTCTGCCGACGGTG CGCGATATCCTCACGGAGCTGGAAAAGCCCGGCCGCGATCCGCGTCCGGAGTTCAAGACGGCCACCTTCCGGGACGGCGT CGAGTCGCTTGCCGACTTACAGCCGGGGATGGTCCTCGAAGGAGTGGTGACCAATGTCGCGGCCTTCGGCGCGTTCGTCG ACATCGGCGTGCACCAGGACGGCCTCGTGCATGTGTCTGCGCTGGCGAACAAGTTCGTCAAAGATCCGCATGAAGTCGTG AAACCGGGTCAGATCGTGAAGGTGAAGGTACTGGCCGTCGATGTGCCGCGGCAGCGGATTTCGCTGACCATGCGTATGGA GGATGCCGCGACGCCGGCCTCACAGCCTGATCCCCGTGCCGGAGGGCCGCGTGACACGCGCGACCGGCGCCCCGCCGATC AGCAGCGGGGTGGGTCCCGTGAGCCTCAGCCTATCGGGGCATTTGCGCTGGCCTTGGCTCGTGCCAAAGAGAAAAAGTAG Protein sequence : MSSSTIPTISPAAQQRIVDLIAKELGVTAPQIAAAVTLLDGGATVPFIARYRKEATSNLDDTHLRSLEERLLYLRELEER RQTILASIEEQGKLTDELRRAVEQAATKQAVEDIYLPYKPKRRTKAQIAREAGLEPLANALLADPTLDPDQEAAKYVKVV PAAEGVDAINVPDAKTALEGARDILVERFAETAELLATLRAKLWNEGIVTSTVMPGQETAEEEKFRDYYAYSETIRTIPS HRALAMFRGRTLGVLKLDLGLGESLEAVVPHPCAAMIAAHFGIEHRGRRADKWLTDVCYWAWRVKVHLHLSTELLLQVRE AAEAEAIKIFGRNLHELLLAAPAGPKAVLGLDPGLRTGCKVAVVDATGKLLDTATIYPHQPRNDWQGALATIVQLVLRHG VELISIGNGTASRETDKFAAEVVKLVGEQKPEQKLAKIVVSEAGASVYSASAFAAAEFPALDVSLRGAVSIARRLQDPLA ELVKIDPKSIGVGQYQHDVNQRALARSLDATVEDCVNAVGVDVNTASAPLLARVSGLNRVLAQNIVEYRDTHGRFQNRHM ILNVPRLGEKTFEQAAGFLRINDGDNPLDRSAVHPEAYPVVERMLARLKKGIAEVMGKPAVLKELSPAEFTDETFGLPTV RDILTELEKPGRDPRPEFKTATFRDGVESLADLQPGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSALANKFVKDPHEVV KPGQIVKVKVLAVDVPRQRISLTMRMEDAATPASQPDPRAGGPRDTRDRRPADQQRGGSREPQPIGAFALALARAKEKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 61 |
