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Name : rplS (NIDE3070) Accession : YP_003798691.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 3025147 - 3025551 bp Length : 405 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11297922, 16272117, 2665813, 339951; Product type s : structure DNA sequence : ATGAATCGGCTAGAACGGATCCAACGATCCTTAACCAAGAAGACGACGCCCAAGTTCGAGATCGGGGATACTGTTCGTGT CCACGTGAAGGTGGTCGAGGGTGAAAAAGAGCGTATCCAGGTGTATGAAGGAACGGTCATCGCGAGAAAAGGCACGCTCA ATAGCGAAACCTTCACCGTGCGCAAGCTGTCCTACAATGTCGGCGTGGAGCGGACCTTCCCCATCCACTCGCCCAATGTG GCCAAGGTTGATGTCGTCCGTCAAGGTCGCGTTCGTCGGGCCAAGCTCTACTATCTGCGCACCAAGAAGGGTAAGTTCGC CAAGGTGGAAGATCGCGAATTTAAGGTCGAGAGCAAGGCGCAAACCGCGGCCAAGCTGGAGGCAGCCGCAGCTGCCAAGG CCTGA Protein sequence : MNRLERIQRSLTKKTTPKFEIGDTVRVHVKVVEGEKERIQVYEGTVIARKGTLNSETFTVRKLSYNVGVERTFPIHSPNV AKVDVVRQGRVRRAKLYYLRTKKGKFAKVEDREFKVESKAQTAAKLEAAAAAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-28 | 59 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 2e-19 | 50 |
