Gene Information

Name : NIDE2694 (NIDE2694)
Accession : YP_003798325.1
Strain : Candidatus Nitrospira defluvii
Genome accession: NC_014355
Putative virulence/resistance : Virulence
Product : exopolysaccharide production protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : 2.7.8.-
Position : 2635627 - 2636271 bp
Length : 645 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 2050634; Product type e : enzyme

DNA sequence : 
GTGACGGTTGATCGGTCGTGTTCCGAAGGGTTTGTCCGGACGCGATGGGACAAACGGATGCTGGACCTGACCCTCATTCT
TGTGGCCGCGCCGGTTGCGCTGCCGCTGCTGGCAACACTCGCGCTGGCGACGTGGGCCGTGCAAGGCTCACCCGTGTTAT
TCCGCCAGCGGAGGCCAGGTATCGAGGGGAAGCCGTTCACCATCTATAAGTTCCGCACCATGCGCCAGCTTCCTCCCGGG
GTCGCGGCCGATGCGAAATCTGACGGCGAGCGGCTGACCAGGTTCGGGAAGTTGCTCCGGAGCACGAGCCTCGACGAATT
GCCGGAACTGATCAACGTCATCAAGGGCGATATGAGCCTGGTAGGGCCCAGGCCCTTGCTCATGCAGTACCTCGATCGCT
ACACACTCGAACAACAGCGCCGGCATGATGTCTTGCCGGGTATTACGGGCTGGGCACAAGTGAATGGTCGGAACGCCCTG
ACCTGGGAAGAAAAATTCGATCTCGACCTCTGGTACGTAGCCAACCATTCCCTCTGGGTCGATCTGAAGATCCTCGCCAT
GACGGCCTGGAAGGTAATCCGGCGCGAGGGTATTCAACACCCTGGCCAGGTGATCATGGAAGAGTTCAAGGGTTACCGCA
ACTGA

Protein sequence : 
MTVDRSCSEGFVRTRWDKRMLDLTLILVAAPVALPLLATLALATWAVQGSPVLFRQRRPGIEGKPFTIYKFRTMRQLPPG
VAADAKSDGERLTRFGKLLRSTSLDELPELINVIKGDMSLVGPRPLLMQYLDRYTLEQQRRHDVLPGITGWAQVNGRNAL
TWEEKFDLDLWYVANHSLWVDLKILAMTAWKVIRREGIQHPGQVIMEEFKGYRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-28 46
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-27 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NIDE2694 YP_003798325.1 exopolysaccharide production protein VFG1369 Protein 4e-21 44
NIDE2694 YP_003798325.1 exopolysaccharide production protein VFG1309 Protein 2e-28 42