Gene Information

Name : NIDE2672 (NIDE2672)
Accession : YP_003798303.1
Strain : Candidatus Nitrospira defluvii
Genome accession: NC_014355
Putative virulence/resistance : Virulence
Product : putative Vitamin B12 import system, ATP-binding protein BtuD
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.-
Position : 2614024 - 2614920 bp
Length : 897 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10417152, 11421269, 12004122, 12475936, 15111107, 2229036, 9640644, 9872322; Product type pe : putative enzyme

DNA sequence : 
ATGACGTGGATCGACCACACCGCTCTGACCGAGGCCGGAGGCCTAGAGGCCGGTCTGGTGGCGCACCCTGCCTATACGGT
TGGCGGGGTGCATTTTCGTTACGGACAATCGCGATCACAGGGAGAGCCGTGGGTGCTTCGAGATGTGACGCTGGAGGTTG
CGCAAGGCGAGATCCTGGGCATCGTCGGGCCGAATGGGTCCGGCAAGACATCGTTGTTGAAACTGTTGGCGAAATTGGCT
GTGCCACAGGAAGGGGAGATCGCCCTGTTCGGACGACCGTTGCGCGGCCTCTCTCACGAGGTGGTGGCGCAGACCGTCGC
GGTGGTGCCGCAGGACAGTCCGCAGATGTTTCCGTTCACCGTCGCGGAGACCGTCTTGATGGGGCGATTTCCCCACCGTC
GGCGGTCGGGGTGGAGCCTGGGATTCGGCTGGGAGGATGGGGATGATTGTCAGGCGGCATCACAGGCGATGGTCACGATG
GACATTGCGCATCTCGCCGGGCGAGCCGTGACCGACCTGTCCGGAGGCGAGCGTCAGCGCACCATGATTGCGCGGGCATT
GACACAAGCTCCCCGTGTGTTGTTGCTCGATGAGCCCACGGCCTTTCTGGATTTGCAGCACCAGCTGGGCATTTGTGCGA
CCTTGCGCCGACTGTGTGACGAGCGCGGGTTAACGGTCGTGATCGTCTCGCACGATTTGAACCTTGCCAGTCAGTATTGT
GATCGTGTGGCCATGTTGAGGGCGGGGCAGGTGCGGACGGTCGGCGCGCCCGCCGAGGTCATGTCGGTGGAGGTGTTGCG
GGAGGTGTATGGCTGCGAGGTCCTGATTGATGCGCATCCCCAGTCGGGATTGCCTCGGATCACGTTGCCGCGGCAAGGGA
TGCCGTTCAGGGGTTAA

Protein sequence : 
MTWIDHTALTEAGGLEAGLVAHPAYTVGGVHFRYGQSRSQGEPWVLRDVTLEVAQGEILGIVGPNGSGKTSLLKLLAKLA
VPQEGEIALFGRPLRGLSHEVVAQTVAVVPQDSPQMFPFTVAETVLMGRFPHRRRSGWSLGFGWEDGDDCQAASQAMVTM
DIAHLAGRAVTDLSGGERQRTMIARALTQAPRVLLLDEPTAFLDLQHQLGICATLRRLCDERGLTVVIVSHDLNLASQYC
DRVAMLRAGQVRTVGAPAEVMSVEVLREVYGCEVLIDAHPQSGLPRITLPRQGMPFRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NIDE2672 YP_003798303.1 putative Vitamin B12 import system, ATP-binding protein BtuD BAC0164 Protein 3e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NIDE2672 YP_003798303.1 putative Vitamin B12 import system, ATP-binding protein BtuD VFG1042 Protein 2e-28 41