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Name : kdsD (NIDE2557) Accession : YP_003798191.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 2501233 - 2502270 bp Length : 1038 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10203754, 12805358, 16765569, 9020585; Product type e : enzyme DNA sequence : ATGGGACGCAGCCGCAAAATAACCGGGTCCGCCACATCACCCGCACCCAAGCGCGCCGCTCGACGCCCTCAACAGGATGC CAGCGTGCAGGAGGGGAGACGTGTCCTGGAGATCGAAGCGCGAGCCGTTCAGGAATTGATGGCTCGTCTCGACGACCGGT TCGCCTCGGCCGTCAACTTTCTCTACGAATGCCAGGGCAAGGTGGTCATTTCCGGTATGGGCAAGTCCGGACTGATCGGC CAGAAAATCGCGGCGACATTGGCCAGCACCGGCACCCCTTCCTTCTTCCTGCATCCGGCGGAAGGCGTCCATGGCGACCT CGGCATGCTGGCTCGACGGGATGTGTTGATCGCCATCTCCAATAGCGGCGAAACACAGGAAGTCCTCCAATTGCTGCCCT TCGTGAAACGCATGAATATTCCAGTCGTGGGAATGACGGGAAAAATGGGCTCCACGCTGGCGAAAAACAGCGATGTCACC CTCGATGTATCGGTCGATGAAGAAGCCTGCCCGCTGGGATTAGCCCCGACGGCCAGTACCACCGCCACCCTCGCCATGGG TGATGCGCTCGCAGTCGCGCTGCTTCAAAAGCGCGGCTTCAAGCACGACGATTTCGCGCAGTTTCACCCGGGCGGCACCC TGGGGCGACGGCTGCTGGTGAAAGTGCGTGACCTCATGCAGCATGGGGATCACCTGCCGCGTGTGCGCGACAACGTCTCC GGCGCGGACATGATTCTGGAGATGACGTCAAAGAAACTCGGGATGACGACCGTGGTCGACGCCAAGGGGGCGCTGTACGG AATCGTGACCGACGGGGATTTGCGGCGCTTCATTCAAGCAGGCGGGGACTTCAGCAACATCACCGCCGGGGATCTCGCCA GTCGCCAACCGAAAACCATCGGGCCGGACGAACTGGCCACGACGGCCGTCGCGCTGATGGAACGGTTTTCCATCACGGCG CTGGTGGTCCTGGAGAGGCCGAATCGCCTGGCAGGCGTCATTCACTTGCATGACCTGCTCAAACACGGCATTGTGTAG Protein sequence : MGRSRKITGSATSPAPKRAARRPQQDASVQEGRRVLEIEARAVQELMARLDDRFASAVNFLYECQGKVVISGMGKSGLIG QKIAATLASTGTPSFFLHPAEGVHGDLGMLARRDVLIAISNSGETQEVLQLLPFVKRMNIPVVGMTGKMGSTLAKNSDVT LDVSVDEEACPLGLAPTASTTATLAMGDALAVALLQKRGFKHDDFAQFHPGGTLGRRLLVKVRDLMQHGDHLPRVRDNVS GADMILEMTSKKLGMTTVVDAKGALYGIVTDGDLRRFIQAGGDFSNITAGDLASRQPKTIGPDELATTAVALMERFSITA LVVLERPNRLAGVIHLHDLLKHGIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-58 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 5e-59 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-58 | 45 |
