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Name : kdsB (NIDE2554) Accession : YP_003798188.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 2497873 - 2498664 bp Length : 792 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11802716, 3023327, 6259128, 7543480, 8706906; Product type e : enzyme DNA sequence : ATGCCCTGGGACAACATTGACGTGAAACGTTCGGTGACGGTGGTGATTCCAGCCCGGTACGGCTCTTCACGATTCCCGGG CAAACCGCTGGTTGAGTTGCTGGGCAAACCGATGATCCAACATGTCTATGAACAGGCACAGGCTTGTCGCGCGGTCGATG ACGTGCTGGTCGCCACGGATGACGAGCGCATCAAAACGGCGGTTCAGCGCTTCGGCGGCCAGGTCGTGATGACGACGGAG CCCTATCGCACCGGCACCGACCGCGTCGCCGCCGTCGCCGAGAGCCGCACCGGCGACTGCTTCGTCGACCTGCAGGGCGA CGAGATCCTGCTCCATCCCGATCTCATCACCGACCTGGTCGAGCCGTTTCTGGACAGCGATGCCACGATGGGCACCTTGA AACGACAGATCGATTCCGATCAAGATCTCCACAACCCGGGTGTGGTCAAGGTGACCACCGACCGCGAGGGCTACGCATTG TATTTTTCCCGCGCGCCGATTCCGTTGGTGCGGGACGATCCGAAGCGGGCTGCGGTGCCGGGACTGCATTTCATTCACCT GGGCTTGTACATCTATACCCGGGACACATTGCAACGCCTGACTGCCTTGCCGACAGGGACGTTGGAAGAGGCCGAAAAAC TCGAACAACTGCGCGCCTTGGAAAACGGTATGCGCATCCGTGTGTGGGAAACCATCCACGGCTCCTTGCGCATCGATAGC CCCGAGGACGTGCCCGGCGCACTGAAACACCTTCACAGCCGTGCAACCGGACTCGGCATCACTCACTCATGA Protein sequence : MPWDNIDVKRSVTVVIPARYGSSRFPGKPLVELLGKPMIQHVYEQAQACRAVDDVLVATDDERIKTAVQRFGGQVVMTTE PYRTGTDRVAAVAESRTGDCFVDLQGDEILLHPDLITDLVEPFLDSDATMGTLKRQIDSDQDLHNPGVVKVTTDREGYAL YFSRAPIPLVRDDPKRAAVPGLHFIHLGLYIYTRDTLQRLTALPTGTLEEAEKLEQLRALENGMRIRVWETIHGSLRIDS PEDVPGALKHLHSRATGLGITHS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 9e-40 | 44 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-39 | 44 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 4e-39 | 44 |
