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Name : clpB3 (NIDE2457) Accession : YP_003798092.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2402628 - 2405057 bp Length : 2430 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10982797, 11580258, 12054807, 12205096, 12475170, 12624113, 14567920, 14640692, 14738756, 15037248, 15554981, 2066329, 2185473; Product type f : factor DNA sequence : ATGTTCGAACGGTTCACGGACAAGGGTCGCAAGATCATCATCCTGGCACGTGAAGAAGCCGAGCGCCATCAGAACGATTA CCTGGGCACCGAGCACCTGGTGTTGGCCATCCTTCGCGAGACGGATGGGATTGCGCTGATGATCCTCAAGAAAATGGGGC TCTCCACCGAGCAGATTCGACTCGAAATCGAGCGGAATCTCCCGGGTGGGGGCACAACGATGACCTTCGGGGAAATTCCC TTCAGCCCGCGGGTCAAGAAAGTCATCGAGTACGGGGTGGAAGAAGCCCGGTTGCTCGGTCATAACCACATCGGCAGCGA ACATCTGCTGCTCGGTCTCCTTCGGGAGGAAGAAGGCATCGGCGGGAAGATTCTCCGGAGTCTGGGCGCCAACCTCCTGA CCGCGCGGCAACTCACCGTCACCTTCCTGCGTAAGTCTGCGCCGCGTGAGCGGGATCGCAAGAGCAATACGCCGGCTCTC GATGAATTCGGACGCGACCTGACCCAGCTGGCCCAGGAGGGGCAGTTGGATCCTGTCATCGGTCGCGCGGACGAAATCGA GCGGGTCTTGCAGATTCTCAGCCGACGGTCGAAAAACAATCCGGTCCTCATCGGCGAATCCGGCGTGGGAAAGACAGCCA TCGTCGAAGGACTCGCGCAGCGTATCATCGCGTCGGAAGTCCCCGACAATCTGCTGTCTCGTCGCGTCATCGCACTCGAC CTGGGCTCGCTGGTGGCAGGCACGAAATACCGCGGCCAGTTTGAAGAACGCCTCAAGGTCGTGATGAAGGAGATCGTGCA GGCCGGGAACATCATTATCTTCATCGACGAATTGCACACGTTGGTCGGGGCAGGGGCGGCAGAAGGATCGATCGATGCCT CCAACATGCTCAAGCCGGCGTTGTCCCGCGGTGAAATTCAGTGCATCGGCGCCACGACGCTCGACGAATACCGCAAACAC ATCGAGAAAGACGGCGCGCTCAAACGTCGCTTCCAACCCATTCACGTGCAGCCGCCCAGCACGGATGAAACGGTACGGAT CATCCAGGGCTTGCGGGACCGGTACGAGGAACACCATGGGGTGGAAATCACGGAAGATGCCATCGTGGAAGCCGTCAAGT TGGCGGATCGTTATATTACCGACCGGTTCCTTCCGGACAAGGCTATCGACCTGATCGACGAAACCGGCTCGCGAGCGAAG TTGCAGACCTACGCGCTGCCGACTGAGCTCAAAGCGCTGGAGCAAGAGCTCAAGAAAATTTCCCGCGATAAAGAGCTGGC GATCTCGATGCAAAACTTCGAGGAAGCCGTCCGTCATCGCGAAGAAGAAGAGCGTCTGCGAAAGCTCCTCGACGAATCCA AGCGGGAGTGGAAGAAGAATCAGGAGAAACACAAGCCGACCATCGGCAAGGAAGAAGTCGCGTATGTCGTCTCGAAGATG ACCGGCATTCCGCTCTTCAAGTTGGAAGAAGAAGAGTCCAATAAACTGCTCCGCATGGAAGAATTCCTCCACAAGCGGGT CATCGGACAGAACGAAGCTATTTCGGCTGTGGCGCGTGCCATTCGTCGATCCAGAGCGGGCCTCAAGGAAGCGAAGAAAC CCATCGGCTCCTTCATTTTCCTCGGCCCGACCGGTGTCGGAAAAACGGAATTGGCACGGACCCTCGCGGAGTTTCTCTTC AACAGCGAAGATGCGCTCATCCGGATCGATATGTCCGAGTATCAGGAAAAGTTCACAAGCTCACGCCTCTTCGGAGCCCC TCCGGGATACGTCGGCTACGAGGAAGGCGGCCAGCTCACTGAAAAGGTTCGACGTCGTCCTTACTCGGTCGTGCTGTTCG ACGAAATCGAGAAAGCGCATCCGGACGTGTTCAACGTCCTGCTGCAGGTGCTCGACGACGGTGTCCTCACGGACAGCCTG GGTCGAAAGGTCGATTTCAAGAACACGGTCGTGATCATGACCTCGAACATCGGCACGAAAATGATCCAAAAAGGCGTCTC GCTCGGATTCCAGAATGATGAAAAGGGCGGACAGGCCTTGCGCCGCAAAGAAGACGTGATGGGAGAACTCAAGCGTTCGT TCAGCCCGGAGTTCCTGAACCGGATCGACGAAATCGTGATCTTCCATTCCCTGGAGAAGGAGCACTTGATCCACATCCTC GATATCCTGCTGCACGAACTGAATCTCCGCCTGATCGACAAGAGCGTCAGCATCGAGGTGGACGACGAAGTGAAACAGTG GCTCATCAAGGAAGGATACGAGCCGCTCTACGGTGCGCGCCCGATGCGCCGCATCATCCAACGGGCGATCGGCGATCCCC TGTCTGAAGAACTCATCAAGGGTCGCTTCAAGGAGAACCGGAAGATCAAAGTCGTGCTGCGCGACGGCGCGCCGGCCTTT ATCGAGCAGGAAGCGATGGCGGGCGTCTAG Protein sequence : MFERFTDKGRKIIILAREEAERHQNDYLGTEHLVLAILRETDGIALMILKKMGLSTEQIRLEIERNLPGGGTTMTFGEIP FSPRVKKVIEYGVEEARLLGHNHIGSEHLLLGLLREEEGIGGKILRSLGANLLTARQLTVTFLRKSAPRERDRKSNTPAL DEFGRDLTQLAQEGQLDPVIGRADEIERVLQILSRRSKNNPVLIGESGVGKTAIVEGLAQRIIASEVPDNLLSRRVIALD LGSLVAGTKYRGQFEERLKVVMKEIVQAGNIIIFIDELHTLVGAGAAEGSIDASNMLKPALSRGEIQCIGATTLDEYRKH IEKDGALKRRFQPIHVQPPSTDETVRIIQGLRDRYEEHHGVEITEDAIVEAVKLADRYITDRFLPDKAIDLIDETGSRAK LQTYALPTELKALEQELKKISRDKELAISMQNFEEAVRHREEEERLRKLLDESKREWKKNQEKHKPTIGKEEVAYVVSKM TGIPLFKLEEEESNKLLRMEEFLHKRVIGQNEAISAVARAIRRSRAGLKEAKKPIGSFIFLGPTGVGKTELARTLAEFLF NSEDALIRIDMSEYQEKFTSSRLFGAPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNVLLQVLDDGVLTDSL GRKVDFKNTVVIMTSNIGTKMIQKGVSLGFQNDEKGGQALRRKEDVMGELKRSFSPEFLNRIDEIVIFHSLEKEHLIHIL DILLHELNLRLIDKSVSIEVDDEVKQWLIKEGYEPLYGARPMRRIIQRAIGDPLSEELIKGRFKENRKIKVVLRDGAPAF IEQEAMAGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB3 | YP_003798092.1 | chaperone protein ClpB | VFG0079 | Protein | 0.0 | 56 |
| clpB3 | YP_003798092.1 | chaperone protein ClpB | VFG0080 | Protein | 4e-138 | 52 |
