|
Name : fliP (NIDE2302) Accession : YP_003797940.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2245977 - 2246777 bp Length : 801 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1597417, 2921241, 7601828, 7828930, 8282695, 9161424, 9324257; Product type t : transporter DNA sequence : GTGCACGCAGGTAGTGTCCTGAGCCGCCCGGGACAGCCATCGGTCGCGCAACGTTCCGGATGGTGGACCGGCTGCCTCAT GAGTGTAGCCATCTTCGCCTGCCTGTTCGTCGCCACTTCCGCATACGCCGATGGGCCATCGCTCACGATCGATCTCGGCC AGGGCGGGAGCAAGCAGACTGCCGTAGTCCTGCAGATTCTGGCTCTGTTTACCGTCCTCTCCCTGGCGCCTGCCTTGTTC ATCATGGTGACATCGTTTACCCGTATGGTCATCGTGCTGTCCTTTCTTCGCCAGGCCATGGGGACGCAGCAGGTACCGCC CAATCAAGTTCTGATCAGCCTGGCGTTGTTTCTGACCATGTTCGTGATGGCTCCCGTCGGGCAGGCCGTCTACAAGGATG CCCTGCAACCGCTGCTCGCCGAGCAAATCGGGTACGAAGATGCCTGGAATCGGGGAATTCAGCCGATCCGGGCCTTCATG TTGAAACAAATGCGCGACAAGGATCTCGAACTGTTCATGGAGCTGTCGCACGCGCCAAAAGCGACGCAGGTCGAACAGGT GCCGATCCACGTGATCATTCCCGCCTTCGTCCTGAGTGAGCTGCGGATTGCGTTTCAGATCGGATTTCTTCTCTACATTC CGTTCCTCATCGTGGACATGGTCGTCGCCAGCGTCTTGATGTCCATGGGCATGATGTTGTTGCCGCCGGTCATGATTTCG CTGCCGTTCAAACTGATTTTGTTCGTGCTTGCCGACGGCTGGTATCTGGTCGTCGGATCGATGGTCAGAAGCTTTCAGTA G Protein sequence : MHAGSVLSRPGQPSVAQRSGWWTGCLMSVAIFACLFVATSAYADGPSLTIDLGQGGSKQTAVVLQILALFTVLSLAPALF IMVTSFTRMVIVLSFLRQAMGTQQVPPNQVLISLALFLTMFVMAPVGQAVYKDALQPLLAEQIGYEDAWNRGIQPIRAFM LKQMRDKDLELFMELSHAPKATQVEQVPIHVIIPAFVLSELRIAFQIGFLLYIPFLIVDMVVASVLMSMGMMLLPPVMIS LPFKLILFVLADGWYLVVGSMVRSFQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 4e-28 | 43 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-32 | 41 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-31 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 2e-22 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 2e-22 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_003797940.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 3e-50 | 55 |
| fliP | YP_003797940.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 1e-54 | 54 |
| fliP | YP_003797940.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 1e-53 | 53 |
| fliP | YP_003797940.1 | flagellar biosynthetic protein FliP | VFG2016 | Protein | 3e-52 | 52 |
| fliP | YP_003797940.1 | flagellar biosynthetic protein FliP | VFG0394 | Protein | 1e-32 | 41 |
