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Name : serS (NIDE2193) Accession : YP_003797834.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2134145 - 2135431 bp Length : 1287 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10966471, 1852601, 1859832, 2053131, 2203971, 2963963, 7537870, 7540217, 8128220, 8128224, 8274143; Product type e : enzyme DNA sequence : ATGTACGACCTTCGTGTATTGCGTGACAACCTGGACCAGCTCCGTGACCAATTGGGGGCACGCGGGAAGGATGTCGCGTG GGCAGATCTGAGAACACTCACGGAAGATCGTCGAACCCGCACCATACGGGTCGAAGAACTACGGCACCAGCTGAAAAAGG GATCGGACGACGTCGCCCGGCTGAAGCGAGAGAAGCAGCCGGCCGATGAGGCCATGGCGGCGATGAAGGCCTTGGGAGAG ACGATCAAAATCCATGAGGAACAGCTTCGTGTCGTGGAAGAACAGTTGGCCCATATCGCGCTGCGCATTCCGAACCTCCC ACACACCTCTGTCCCGGACGGCCGGGATGAGGCTGACAATATTGAAGTGCGCCGATGGGGAACACCGCCGCAGCTCTCGG CTCCGGCCCAATCCCACTGGGATCTTGGCGAAGCGCTCGGCATTCTGGATTTCGATCGCGCGGTGCGCATGGCCAAAGCC CGCTTTGCCGTACTGACCGGATCGGGAGCCCGACTCGAGCGGGCGCTCATCAATTACATGCTGGATATGCATACCACCCG GCACGGCTACCGGGAAGTGCTGCCGCCGCTGCTGGTCAATCGCACGGCCATGACCGGGACCGGGCAATTACCCAAGTTCG AGGACGATCTGTTTCAACTGCGAGATGAAGAACTCTTCCTGATTCCGACCGCGGAGGTGCCGGTCACCAATCTGCACCGG GAAGAGATCATGGCCGAGGAATCGTTACCGATCCGGTATACCGCCTATACCCCTTGCTTTCGACGAGAAGCGGGGTCCTA CGGGAAGGACACGCGCGGCCTCATTCGGCTCCATCAATTCAACAAGGTCGAACTCGTCGCGTTCGCAAGACCGGAACAAT CCTATGATGAGCTGGAGAGATTAACCTCGCACGCCGAGGCCATTTTGCAGGGGTTGGGACTGCACTATCGAGTGATCACC CTGTGCAAAGGGGATATGGGGTTTTCTGCAGCGAAGACCTACGACATTGAGGTATGGTTGCCGTCGCAGCAGACGTTTCG CGAAATTTCCTCCTGCAGCAATTTCGAAGCGTTCCAAGCGCGGCGGGCAAACATTCGCTGCCGGGCCAAGGCCGGGAAGA AAGACAACAAGCCTGAATTCGTTCATACCCTGAACGGATCCGGCTTAGCGGTGGGAAGAACCCTTGTCGCCATTCTTGAA AATTATCAGCAACCGGATGGTACGGTGACCGTCCCGACAGCTCTTCAACCCTATATGGGTGGAATGCGGACTATCGAACG ATCTTAG Protein sequence : MYDLRVLRDNLDQLRDQLGARGKDVAWADLRTLTEDRRTRTIRVEELRHQLKKGSDDVARLKREKQPADEAMAAMKALGE TIKIHEEQLRVVEEQLAHIALRIPNLPHTSVPDGRDEADNIEVRRWGTPPQLSAPAQSHWDLGEALGILDFDRAVRMAKA RFAVLTGSGARLERALINYMLDMHTTRHGYREVLPPLLVNRTAMTGTGQLPKFEDDLFQLRDEELFLIPTAEVPVTNLHR EEIMAEESLPIRYTAYTPCFRREAGSYGKDTRGLIRLHQFNKVELVAFARPEQSYDELERLTSHAEAILQGLGLHYRVIT LCKGDMGFSAAKTYDIEVWLPSQQTFREISSCSNFEAFQARRANIRCRAKAGKKDNKPEFVHTLNGSGLAVGRTLVAILE NYQQPDGTVTVPTALQPYMGGMRTIERS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-107 | 57 |
