|
Name : NIDE2133 (NIDE2133) Accession : YP_003797778.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2043508 - 2044317 bp Length : 810 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 10384240, 8696976; Product type h : extrachromosomal origin DNA sequence : ATGTGTGACCGAGGCCTAACCGAGCGGTGTGCCTTGAAAGTGATGGGGATGAGTGCCAGCAGCTTGCGGTACCGACCCGC ACCGGACCGGAATGCCGAACTGCGGACCGCCATGACCACACTGGCTGCTCGCCATCCGCGGTACGGGGCCGGCATGCTGT ATCTCAAGTTGCGGCAGCAGGGGCACATGGTCAATCACAAACGGGTAGACCGCCTCTATACAGAGGCCCAGTTGCAGCTA CGGCGCCGTACCCGCAAGAAGGTGCCAGTGGGGGCGCGTCAGCCGCTGGTACGGCCTGACGCGGCGAACGCAGTCTGGTC CATGGATTTCGTGTTCGACCGCAGTGCGGAAGGCCGAGTCATCAAGTGTTTGACGATCGTGGATGATGCGACGCATGAGT CGATCGCCATTGTGCCGGCACGCACCCTCAGCGGGACGCATGTGACGCGGACCCTGGATCAGTTGGCGACGACTCGCGGG ATCCCGCAGGTGATTCGGACTGACAATGGGAAGGAATTCTGTGGTCGAGCCATGCTGACCTGGGCGCATACGCACACGGT GACGCTGCGGCTGATTGAACCCGGCAAGCCCAACCAGAATGCCTACATTGAGTCATTTAATGGACGCTTCCGTGATGAGT GCTTGAACGAGCACTGGTTTCTGAATCTCGCCCATGCCCAAGTCATCATTGAAGCGTGGCGGCGTGAGTACAACGAGGAA CGACCGAAGAAAGCGCTGGGTGGGCTGACGCCTGCCGCCTATGCGCAGCAATTGGCCAGCAAATCAGCTACAGTAGTCCC CGGACTCTAA Protein sequence : MCDRGLTERCALKVMGMSASSLRYRPAPDRNAELRTAMTTLAARHPRYGAGMLYLKLRQQGHMVNHKRVDRLYTEAQLQL RRRTRKKVPVGARQPLVRPDAANAVWSMDFVFDRSAEGRVIKCLTIVDDATHESIAIVPARTLSGTHVTRTLDQLATTRG IPQVIRTDNGKEFCGRAMLTWAHTHTVTLRLIEPGKPNQNAYIESFNGRFRDECLNEHWFLNLAHAQVIIEAWRREYNEE RPKKALGGLTPAAYAQQLASKSATVVPGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 3e-52 | 58 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 2e-60 | 53 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 2e-35 | 52 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 1e-40 | 42 |
