Gene Information

Name : NIDE0204 (NIDE0204)
Accession : YP_003795914.1
Strain : Candidatus Nitrospira defluvii
Genome accession: NC_014355
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 168157 - 169110 bp
Length : 954 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGATGACCTCTCCGCTTCGCCTGGGCATCAGCCGTTGTCTGCTCGGGGAGGAGGTCCGTTTCGATGGAGGCCACAAACG
GGACGTGTTTCTGACCGAGGTGCTGGGTCGGTACGTTGAGTGGGTGCCGGTCTGTCCGGAAGTCGAAGCCGGGCTCGGGA
CACCGCGTGAAGCGATGCGACTGATCGGCAATCCCCAACAGCCGCGGCTGGTCGCCATCAAGAGCGGGCGGGATCACACG
CTGGCGTTGGAGACGATGACCGGGAAGCGCCTGGGTGATCTTGAGCAGCTGGACTTGTCCGGGTTTGTGTTCAAGAAAGA
CTCACCGAGTTGCGGGGTGGAGCGGGTTCGTACATACAACGAGCATGGCATGCCGGGCAGAAAGGGTGTGGGATTGTTTG
CACGCGCCTTTCTCGATCGGTTTCCGCTCATTCCGGTGGAGGAAGAGGGGCGGCTCTGCGATCCGATCCTGCGGGAAAAC
TTCATCGAGCGGGTGTTCTGTTATCGTCGTTGGCAGGATCTGATGCAGAGCGGCGTCACCAGGCAGGCGTTGGTGCGGTT
TCATACGATCCACAAATATCTGCTGTTGGCCCATAGCGCCCCGCACTATCGTCAGCTCGGGCGACTGGTGGCGCAGGTGA
ACGAGTATCGCCCGAAAGACCTGGCCATCCGGTACGGCGAACTGTTTATGCAGGCCCTCGCGGCGAAGGCGACGGTGCGA
AAACATGTGAATGTGCTCCAGCACATCCTGGGTCATTTCAAAGAACGGCTGGATGCGGAGGAAAAAGCCGAGCTGTTGAG
CGTGATCGGGGACTACCACCAGGGACTCACGCCCCTGATTGTTCCGCTGACATTGATCAAGCACTACGTACAGATCTTTG
ATGTCGAATACATTCGCGACCAGGTGTATCTGAATCCGCATCCGAAGGAGTTGATGCTCCGCAATCATGTCTAG

Protein sequence :
MMTSPLRLGISRCLLGEEVRFDGGHKRDVFLTEVLGRYVEWVPVCPEVEAGLGTPREAMRLIGNPQQPRLVAIKSGRDHT
LALETMTGKRLGDLEQLDLSGFVFKKDSPSCGVERVRTYNEHGMPGRKGVGLFARAFLDRFPLIPVEEEGRLCDPILREN
FIERVFCYRRWQDLMQSGVTRQALVRFHTIHKYLLLAHSAPHYRQLGRLVAQVNEYRPKDLAIRYGELFMQALAAKATVR
KHVNVLQHILGHFKERLDAEEKAELLSVIGDYHQGLTPLIVPLTLIKHYVQIFDVEYIRDQVYLNPHPKELMLRNHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-54 43
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-54 43
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 5e-55 43
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-54 43
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-54 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NIDE0204 YP_003795914.1 hypothetical protein VFG0490 Protein 6e-55 43