|
Name : NIDE1978 (NIDE1978) Accession : YP_003797627.1 Strain : Candidatus Nitrospira defluvii Genome accession: NC_014355 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3517 EC number : - Position : 1889990 - 1891483 bp Length : 1494 bp Strand : + Note : Evidence 4 : Homologs of previously reported genes of unknown function; PubMedId : 15228535, 16763151, 8573354, 19284603 DNA sequence : ATGGCGGAAGAGGCGAAACAAGCGCAGCCTCAGGGGGCGGCGGTCGCGGGAACCGAGGAGAGCGGGGTTCTTGATCAGAT TATCAATGAAACACGCATCGGAAAAGACGACTGGGAGCGTGACCAGTCGCGCCGGCAGATTTCCACCCTTGTTGAGGAGG TGATGAAAGGCACCCTCCGAGTGTCGAAAGACCTCGAGGCGACGATCAATGCACGCATCGCGGACATCGACAAGGTTTTA TCCGCCCAGCTCAACGCGATCATGCATGCACCGGAGTTTCAAAAGCTGGAAGGGGCCTGGCGCGGGCTGCACTATCTCGT CATGCAAAGCGAAACCAGCACCATGCTGAAAATTCGTGTGCTGAATATCAGCAAGGACGAACTACGGAAGGATCTTGAGA AGGCCGTCGAATTCGACCAAAGCGCACTCTTCAAGAAAGTGTATGAGGAAGAGTACGGGACCTTCGGTGGAGCGCCCTAT GGCGCCTTGATTGGAGATTATGAGTTCGGACGGCATCCTCAGGATTTGGCATTGCTGGAGAAGGTCTCGAATGTGGCAGC TGCGGCACATGCGCCGTTCATCTCAGCGGCTGCCCCGGGCCTGCTGGGGCTTGAAGATTTTACAGATCTTCCGAATCCTC GTGATCTGGCCAAGAAGTTCGAAACGCCGGATTACGCCAAATGGAAGTCGTTTCGTGAATCAGAGGACTCTCGCTATGTG GGGCTCACCTTGCCCCATGTGTTGATGCGGCTGCCGTACGGGCCGGATACGGTGCCGGTCGAGAACTTTAATTTCAAAGA AGACGTCGATGGCACGGACCACAGCAAGTATCTCTGGGGGAATGCCGCCTATGCGATGGGGGCTCGTCTCACGGATGCCT TTGCAAAGTATGGCTGGACCGCGGCCATTCGTGGCGTGGAGGGGGGAGGACGTGTGGATGGGTTGCCGACCCATACGTTC CGTACCGATGAAGGTGAGATTGCGCTGAAGTGTCCGACCGAGATTGCCATCACCGACCGGCGTGAGAAGGAGCTGTCGGA TCTCGGATTTATTCCGCTCGTCCATTGCAAGGGGACAGACTTTGCCGCCTTCTTCGGGGCCCAATCCTGCCAGAAAGCCA AGAAATATGACACGGACGCCGCCAACGCTAATGCGCGGCTCTCAACTCAGCTCCAATATCTCCTGGCGATGTCACGCTTC GCGCATTATCTCAAGTCGATCATGCGGGACAAAATCGGAAGCTTCATGACACGCAAAGATTGTGAGGATTTCCTGAATCG CTGGATCAGCAAGTATGTCGTAAGCACGGAAGATGCCGGGCAGGAGATCAAAGCCAAGTTTCCCTTGAAGGAGGCCCGAG TGGAGGTGGCAGAGGTGGCAGGAAAGCCCGGTGTCTATAGAGCCATTGCTTTCTTGAAGCCTCACTTCCAGTTGGATGAG CTGACAGTGTCGCTCAGGTTAGTGGCTGAGCTGCCGCCGCCGGCCAAGCGGTAG Protein sequence : MAEEAKQAQPQGAAVAGTEESGVLDQIINETRIGKDDWERDQSRRQISTLVEEVMKGTLRVSKDLEATINARIADIDKVL SAQLNAIMHAPEFQKLEGAWRGLHYLVMQSETSTMLKIRVLNISKDELRKDLEKAVEFDQSALFKKVYEEEYGTFGGAPY GALIGDYEFGRHPQDLALLEKVSNVAAAAHAPFISAAAPGLLGLEDFTDLPNPRDLAKKFETPDYAKWKSFRESEDSRYV GLTLPHVLMRLPYGPDTVPVENFNFKEDVDGTDHSKYLWGNAAYAMGARLTDAFAKYGWTAAIRGVEGGGRVDGLPTHTF RTDEGEIALKCPTEIAITDRREKELSDLGFIPLVHCKGTDFAAFFGAQSCQKAKKYDTDAANANARLSTQLQYLLAMSRF AHYLKSIMRDKIGSFMTRKDCEDFLNRWISKYVVSTEDAGQEIKAKFPLKEARVEVAEVAGKPGVYRAIAFLKPHFQLDE LTVSLRLVAELPPPAKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-88 | 41 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 2e-88 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NIDE1978 | YP_003797627.1 | hypothetical protein | VFG2070 | Protein | 4e-120 | 53 |
| NIDE1978 | YP_003797627.1 | hypothetical protein | VFG2475 | Protein | 6e-100 | 43 |
| NIDE1978 | YP_003797627.1 | hypothetical protein | VFG2093 | Protein | 5e-95 | 42 |
