Gene Information

Name : cusR (NIDE1562)
Accession : YP_003797222.1
Strain : Candidatus Nitrospira defluvii
Genome accession: NC_014355
Putative virulence/resistance : Resistance
Product : transcriptional regulatory protein CusR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1482927 - 1483610 bp
Length : 684 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 10966457, 11004187, 11283292, 11399769, 12015152, 12372152, 12837793, 15773991, 16176121, 18076326, 7699720, 9016718; Product type r : regulator

DNA sequence : 
ATGCGCATTCTTCTCGTAGAAGATGATGCTGACCTGGCGCAATTCATCCGAAAGGGCTTGAAGGAAGAGCGCTATGCGGT
GGATGTCGCGTCCAACGGCGAGCAGGGGTTCGAGCTCGGCATCGCGAATCCGTACGATCTCATCATCCTGGACATCATGC
TGCCAGTGCTCGATGGCCTGTCACTGTGTCGTCGTTTGCGCAGCACAGGCGTGACGGCGCCGGTCTTGCTGTTGACCGCA
CGCGATACGGTGCAGGACAAGGTGTCAGGCTTAGACTTGGGGGCCGATGATTATTTGACAAAGCCGTTTGCCTTCGCAGA
ACTCCTCGCGAGGGCGAGAGCCCTGTTGCGGCGGGGCGGGCCTCAACTGCAGGCCCGGCTGACGGCTGCCGACCTGGAGC
TGGATCCGGCGACTCACCGGGTGTGCAGGGGCGGCAATGAAATCGCACTGACGAACAAGGAGTACGCGTTGCTCGAATTT
CTCTTGCGGAACAAGAATCGTGTGCTGACCAGGACCGCCATCATCGAGCATGTGTGGGATATCAGTTATGACCCCATGAC
GAATATCGTGGATGCGCACATCCGGTCGTTGCGGGCGAAGATGGATCGCGACTTTTCCCCCGCGTTGATCACCACCGTGC
GGGGGGCCGGCTATATGCTGGAAGATGAGGAAGCCGGACGATGA

Protein sequence : 
MRILLVEDDADLAQFIRKGLKEERYAVDVASNGEQGFELGIANPYDLIILDIMLPVLDGLSLCRRLRSTGVTAPVLLLTA
RDTVQDKVSGLDLGADDYLTKPFAFAELLARARALLRRGGPQLQARLTAADLELDPATHRVCRGGNEIALTNKEYALLEF
LLRNKNRVLTRTAIIEHVWDISYDPMTNIVDAHIRSLRAKMDRDFSPALITTVRGAGYMLEDEEAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-43 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-42 49
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 4e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cusR YP_003797222.1 transcriptional regulatory protein CusR BAC0308 Protein 1e-44 51
cusR YP_003797222.1 transcriptional regulatory protein CusR BAC0347 Protein 1e-44 50
cusR YP_003797222.1 transcriptional regulatory protein CusR BAC0111 Protein 3e-50 50
cusR YP_003797222.1 transcriptional regulatory protein CusR BAC0125 Protein 1e-46 50
cusR YP_003797222.1 transcriptional regulatory protein CusR BAC0083 Protein 1e-48 49
cusR YP_003797222.1 transcriptional regulatory protein CusR BAC0638 Protein 5e-41 49
cusR YP_003797222.1 transcriptional regulatory protein CusR BAC0197 Protein 2e-44 49
cusR YP_003797222.1 transcriptional regulatory protein CusR NC_010079.5776364.p0 Protein 2e-35 44
cusR YP_003797222.1 transcriptional regulatory protein CusR NC_002952.2859858.p0 Protein 2e-35 44
cusR YP_003797222.1 transcriptional regulatory protein CusR NC_007622.3794948.p0 Protein 2e-35 44
cusR YP_003797222.1 transcriptional regulatory protein CusR NC_003923.1003417.p0 Protein 2e-35 44
cusR YP_003797222.1 transcriptional regulatory protein CusR NC_013450.8614146.p0 Protein 2e-35 44
cusR YP_003797222.1 transcriptional regulatory protein CusR NC_002951.3238224.p0 Protein 2e-35 44
cusR YP_003797222.1 transcriptional regulatory protein CusR NC_007793.3914065.p0 Protein 2e-35 44
cusR YP_003797222.1 transcriptional regulatory protein CusR NC_002758.1121390.p0 Protein 2e-35 44
cusR YP_003797222.1 transcriptional regulatory protein CusR BAC0288 Protein 2e-34 44
cusR YP_003797222.1 transcriptional regulatory protein CusR AE015929.1.gene1106. Protein 1e-31 43
cusR YP_003797222.1 transcriptional regulatory protein CusR HE999704.1.gene1528. Protein 6e-35 42
cusR YP_003797222.1 transcriptional regulatory protein CusR AE016830.1.gene2255. Protein 2e-30 41
cusR YP_003797222.1 transcriptional regulatory protein CusR U35369.1.gene1.p01 Protein 2e-30 41
cusR YP_003797222.1 transcriptional regulatory protein CusR Y16952.3.orf35.gene. Protein 2e-29 41
cusR YP_003797222.1 transcriptional regulatory protein CusR U82965.2.orf14.gene. Protein 7e-27 41
cusR YP_003797222.1 transcriptional regulatory protein CusR AE000516.2.gene3505. Protein 7e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cusR YP_003797222.1 transcriptional regulatory protein CusR VFG0596 Protein 2e-43 50
cusR YP_003797222.1 transcriptional regulatory protein CusR VFG1390 Protein 2e-39 47
cusR YP_003797222.1 transcriptional regulatory protein CusR VFG0473 Protein 2e-27 44
cusR YP_003797222.1 transcriptional regulatory protein CusR VFG1386 Protein 9e-36 41
cusR YP_003797222.1 transcriptional regulatory protein CusR VFG1389 Protein 1e-27 41