Gene Information

Name : LCAZH_0968 (LCAZH_0968)
Accession : YP_003788061.1
Strain : Lactobacillus casei Zhang
Genome accession: NC_014334
Putative virulence/resistance : Unknown
Product : multidrug ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 956419 - 957153 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence :
ATGCAAACAAATCAAGCTGTTCAGGTCAGCGCCCTCACCCAAGGCTATGGTAAACAGATCGTGCTTAAGGACATCAACTT
GACCTTAAATCATGGTCAAATTCTTGCTTTAATCGGTCCTAGCGGTGCTGGCAAAACCACTTTAGTCAGTACCATTATGG
GTATGTTGCGCCCACGCACCGGACAAGTCAGCGTTTTAGGGCAAGCCGTGCCGAATCGTCCCCTACTCGCGAAAATCGGC
TTCATGGCTCAGACTGATGCTTTATATGAAAGTTTAACCGGTGCTGATAACCTGACATTTTTTGCCAAAATGCAAGGCGT
CCCACACGCGCAGATTACCAAACAAATGGCTTATGCTGCTAATGTCGTCAATCTGCAACCGGCCTTAAAGCAACCAGCTA
AGGATTATTCAGGCGGGATGAAGCGCCGATTATCGCTCGCCATCGCCCTCATCAGTCAACCGCAGTTGTTGATTTTAGAT
GAACCGACCGTTGGCATTGACCCTGAGCTGCGTCAACAGATCTGGCATGAATTGCATCGTCTGGCGGATCAGGGTGTCGC
CATTATTTTAACGACCCACGTCATGGCTGATGCCGAAGAAGCGGACACGTTATTGATGATTCGCAACGGGACTGCCATTG
CCCAAGGGACACCGGCACAATTAAAGGCAGATTATCAAACGGACTCGATTGAAGCGGTCTTTTTAGCCGCAGGGAGGCAG
CAAGATGCGCATTGA

Protein sequence :
MQTNQAVQVSALTQGYGKQIVLKDINLTLNHGQILALIGPSGAGKTTLVSTIMGMLRPRTGQVSVLGQAVPNRPLLAKIG
FMAQTDALYESLTGADNLTFFAKMQGVPHAQITKQMAYAANVVNLQPALKQPAKDYSGGMKRRLSLAIALISQPQLLILD
EPTVGIDPELRQQIWHELHRLADQGVAIILTTHVMADAEEADTLLMIRNGTAIAQGTPAQLKADYQTDSIEAVFLAAGRQ
QDAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 8e-55 48
SH0081 YP_251996.1 hypothetical protein Not tested SCCmec Protein 1e-41 47
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 8e-54 46