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Name : LCAZH_0920 (LCAZH_0920) Accession : YP_003788016.1 Strain : Lactobacillus casei Zhang Genome accession: NC_014334 Putative virulence/resistance : Unknown Product : tmRNA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 909385 - 909858 bp Length : 474 bp Strand : + Note : - DNA sequence : ATGGCGAAGAAACATCGACAAAAACCTGACAACCTGCTCGCCCAGAATAAAAAGGCCGGTCATGATTACAACATTCTTGA TACCTACGAAGCCGGTATTGCGCTGACAGGTACCGAAATCAAATCCGTGCGTGATGGCAAGCTGAATTTGCGTGACGGCT TTGCCCGAATTCGGAATAATGAGGCGTGGTTAGAAAACGTCCACATTAGTCCGTATAAAGAGGGCAATTTATTCAACGTT GACCCAATGCGTAATCGCAAGCTGCTCCTGCACAAACGAGAAATTCGCAAGTTAGGTCAAATGACAGCGCGCCAAGGTGT CACGCTTGTGCCGTTGCGGATGTATTTAAAACACGGCTATGCCAAGGTTTTGATTGGTGTGGCTGAAGGGAAGCATAACT ACGACAAACGTGAAACCTTAAAGCGCAAGGATCAGGAACGCGAGGTTCAGCGCGCTTTGAAGGCACGGTATTAA Protein sequence : MAKKHRQKPDNLLAQNKKAGHDYNILDTYEAGIALTGTEIKSVRDGKLNLRDGFARIRNNEAWLENVHISPYKEGNLFNV DPMRNRKLLLHKREIRKLGQMTARQGVTLVPLRMYLKHGYAKVLIGVAEGKHNYDKRETLKRKDQEREVQRALKARY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 8e-39 | 63 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 2e-30 | 48 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 5e-21 | 41 |
