Gene Information

Name : LCAZH_0895 (LCAZH_0895)
Accession : YP_003787992.1
Strain : Lactobacillus casei Zhang
Genome accession: NC_014334
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 880820 - 881485 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
GTGGCCATTTTGACGGCACGACAACTGACGAAGCAATATGCAGGGGAAAGTCGACCGGCCTTAGATCATGCCGATTTGAG
CATTGAAAAAGGCGAATTTGTAGCGGTGGTTGGGCCGAGTGGTTCGGGTAAGTCAACCTTGCTACATCTGCTGGGCGGTA
TTGATCAACCAACCAGTGGTCGGGTACAGCTATACGATACAGATATTTATGCTTTGGATCAGACACAATTGGCGATTTTT
CGGCGGCGACAAGTCGGGTTGATTTATCAATTCTATAATCTGATTCCCGATTTGACAGTGGTCGAGAACATGACGCTGCC
CGCTGACTTGGACGGTCGAACCGTCGCGACATCTGAGTTGACAGAATTACTGGCTACTTTGGGCCTGACGGAAAAGCAAG
ATGCTTTGCCAAATCAACTGTCAGGCGGCCAACAGCAGCGCGTGGCGATTGGCCGGGCACTGATGAATCATCCGGCCATT
ATTTTAGCCGATGAACCAACGGGCAACTTGGACCGCCGTAATTCACAAGACATCATGACCTTATTGCGACAGGCGAATAT
CAAGCAAGGTCAGACTTTAATTGTGATTACGCATGATCCCGATATTGCTAAGCAAGCAGATCGCGTTGTAACCATCAATG
ACGGTGTGCTACGCGAAGGGCGGTGA

Protein sequence : 
MAILTARQLTKQYAGESRPALDHADLSIEKGEFVAVVGPSGSGKSTLLHLLGGIDQPTSGRVQLYDTDIYALDQTQLAIF
RRRQVGLIYQFYNLIPDLTVVENMTLPADLDGRTVATSELTELLATLGLTEKQDALPNQLSGGQQQRVAIGRALMNHPAI
ILADEPTGNLDRRNSQDIMTLLRQANIKQGQTLIVITHDPDIAKQADRVVTINDGVLREGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-31 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCAZH_0895 YP_003787992.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 4e-48 53
LCAZH_0895 YP_003787992.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-45 49
LCAZH_0895 YP_003787992.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-30 47
LCAZH_0895 YP_003787992.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-32 42