Gene Information

Name : LCAZH_0379 (LCAZH_0379)
Accession : YP_003787521.1
Strain : Lactobacillus casei Zhang
Genome accession: NC_014334
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3037
EC number : -
Position : 372524 - 373810 bp
Length : 1287 bp
Strand : +
Note : -

DNA sequence :
ATGGTTGTGGTTAACTTTATTATTCAAAATATTCTGACTCAGGCAGCCATCACCATTGCGTTAATCGCGATGCTGGGCTT
GCTTCTACAACGCAAGTCCTTTGGCGCGGTCCTAACTGGAACCTTCAAGACACTGCTGGGATTTCAAGTATTATCAGCAG
GGTCCGCCATTATTGTCACAGCACTGACGTATTTTGGAAAGATTTTTCAACATGGTTTTCACCTAAAAGGGGTTGTACCC
AGCATTGAGGCGATCAATGGTCAAGCCATGAATACGCTGGGGTTGGGAAATGAAATTGCCTTAACCTTTTTGGGCATTTT
CATTGTCAACATTATCATTGCGCGGTTCTCGCCATGGAAATATATTTTCCTAACCGGACAGGCGCTGTTGTGGATGTCGA
CCATGACGGTTGTCGGCGGCAAGATAGCTGGCTTCAATTCAGTCGTGACCATTCTTGTTGGTAGTGTTATCGGGGGAATT
TTCGCGGTGGCCATGCCAGCCATTGCGCAGCCTTTTGTTCGTAAGATTACCAAGGGCGATGCCATTGCTTTAGGACACTT
TTGTACGATCGGCTACATGGTAGAAGCAGGCGCCGCTTGGATCTTCGGTGAACGTGGCGAAAAGAAACACTCGATTGAAG
ACATCAAGTTACCAAAGTACATGGAATTCTTGCAAGACACGTATCTCTCTGTTGCTGTTGTGATGGTGCCATTGTTTATG
ATCACCGCGGCTTTTGCAGGTCCTAAGTACGCCGGTAACGGCACGAGTCTGAACTATATCATGAATGCTTTCATGATGGG
CATTCAGTTTGTTGTCGGGGTCTATGTCCTACTTGCAGGTGTTCGGCTCTTACTTGGTGAAATCGTTCCGGCTTTCCGTG
GTATTGCGATGAAACTGGTACCAAATGCGAAACCAGCACTTGACTGTCCAGTCTTGTTCCCATTCTCACCAAACGCGGTC
ATCTTAGGCTTCATTACGACAACCATTGGGACCGTCATTGGCATGTTCTTGATGCCTGTTTTCGGACTCGCGGTCATTCT
GCCGGGGATGTTAACTAACTTCTTCGCTGGCGGGACTGCAGGGATCTTCGGAAACGTTGTCGGCGGCCGCCGCGGGGCCA
TCATTGGCGGCATTATCCACGGCCTGTTCATCACCTTGTTGCCAGCGCTGCTAGTAACGGCTTTGACCTCGTTTGGCTTC
GTGAATGCTTCGGCAACTGACTCCGATACGATCGTGGCCATGCTGATGTATGCCTGGATCCTAACGCCGATTCTTAAAGC
AGTTTAA

Protein sequence :
MVVVNFIIQNILTQAAITIALIAMLGLLLQRKSFGAVLTGTFKTLLGFQVLSAGSAIIVTALTYFGKIFQHGFHLKGVVP
SIEAINGQAMNTLGLGNEIALTFLGIFIVNIIIARFSPWKYIFLTGQALLWMSTMTVVGGKIAGFNSVVTILVGSVIGGI
FAVAMPAIAQPFVRKITKGDAIALGHFCTIGYMVEAGAAWIFGERGEKKHSIEDIKLPKYMEFLQDTYLSVAVVMVPLFM
ITAAFAGPKYAGNGTSLNYIMNAFMMGIQFVVGVYVLLAGVRLLLGEIVPAFRGIAMKLVPNAKPALDCPVLFPFSPNAV
ILGFITTTIGTVIGMFLMPVFGLAVILPGMLTNFFAGGTAGIFGNVVGGRRGAIIGGIIHGLFITLLPALLVTALTSFGF
VNASATDSDTIVAMLMYAWILTPILKAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 1e-59 44
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 1e-59 44
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 1e-59 44