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Name : LCAZH_1988 (LCAZH_1988) Accession : YP_003789049.1 Strain : Lactobacillus casei Zhang Genome accession: NC_014334 Putative virulence/resistance : Virulence Product : Clp protease/DnaK/DnaJ chaperone ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1947022 - 1949172 bp Length : 2151 bp Strand : - Note : - DNA sequence : ATGGCAAACTTTAACGATCCGTTTTTCAATCATGATATGGATGATGTTTTTAATCAAATGTTACAAGGTATGGGCAAAGG TGAATCTGCCCGTTATGTGGTAAATGGTCACGAAATGACGCCAGATGAATTCGCACAGTATCGAGCAACTGGGCAGTTGC CGAAGCAAGGTGACGAAATTCCAGTTGAAACGACTGGTGAACAAGCGGTTAAAAAAGGTGGCATTCTTGAAAAGCTTGGG CGTAATTTAACGCAGGAAGCTAAGGATGGTTTGCTTGATCCTGTGATCGGTCGTGAGCATGAAATTCAAGAAACAGCAGA AATTTTGAGTCGTCGGACGAAGAATAACCCGATTTTGGTCGGGGATGCCGGTGTCGGCAAGACGGCGGTTGTTGAAGGTT TGGCGCAGGCGATTGTCAAAGGTAATGTGCCCGAGTCGATCAAGGACAAGCAGATTTGGTCGATTGATTTGTCGAACCTT GAAGCTGGCACGCAGTATCGTGGCAGTTTTGAAGAGAAGATTCAGAATCTGATCAAAGAAGTCAAAGCGGCAGGCAACGT GATTCTGTTCTTTGATGAAATCCATCAAATTCTTGGTGCCGGTGCGACTGGCGGCGAAGAGTCTGGCGGCAAAGGGTTGG CCGATATCATTAAGCCGGCGCTATCTCGCGGTGAGATTACCGTGATTGGCGCAACGACGCAAGATGAGTATCGCAACACG ATCATGAAGGACAGCGCGTTGGCACGGCGGTTCAACGATGTCACCATTAATGAACCGACCGCGGCTGATACCGTTAAGAT TTTGGAAGGCATCAAGAAGCTTTATGAACAGCATCATCACGTTCAATTGCCAGAAAATGTTTTGAAGGCTGCGGTTGATT ACAGTATCCAATATATACCACAGCGGTCATTGCCGGATAAAGCCATTGATTTGATTGACATGACGGCGGCGCATTTGGCA AGCAAGCATCCGATTGTTGATAAGGTTGAACTCGAGAAACAGATTAAGGATCTGAACGCTCAAAAGGATGCTGCAGCCAA GGCGGAGGACTTCGAAAAAGCCGCTAACCTTAAGAAGACGATTGCCGACAAGCAACATCAGCTTGATGGTACGAAAGACG AGAAGCCTGTCGTTGCAACGCCTAATGATGTAGCGGCTGCGGTTGAACGCTTGACTGGTGTGCCAGTTTCCAAACTTGGC GCTTCCGATATTGAACGTCTGAAGGGTATTGGTAAGCGTCTTAAGGGCAAGGTCATTGGTCAGGACGAAGCCGTTGAGAT GGTCGCTCGCGCCATTCGCCGCAATCGAGCCGGCTTTGATGAAGGCAATCGGCCAATTGGCAGTTTCCTCTTTGTCGGGC CTACCGGTGTCGGCAAGACTGAATTGGCCAAGCAATTAGCGTTAGATCTTTTTGGCAGCAAGGATGCGATCATTCGCTTG GATATGTCTGAATACAGTGATCGCACGGCAGTTTCCAAGTTGATCGGTACCAGTGCCGGGTATGTTGGCTATAACGACAA CAACAACACCTTGACCGAACAAGTACGTCGCAATCCATATTCGATTGTTTTACTTGATGAAATCGAAAAGGCTGATCCGC AAGTTTTGACTCTGTTACTTCAGGTGCTGGACGATGGTCGGTTGACGGATGGTCAAGGTAACGTGGTTGACTTTAAGAAC ACAGTGATCATCGCGACTTCCAATGCTGGCTTTGGCAACGAGACGCTGACTGGCAAGAAGGAGCAAGACGAAGATCTGAT GAAGCGGTTGGCACCTTACTTCCGTCCTGAATTCCTGAACCGGTTTAACGGGATCGTTGAGTTTAGTCATCTGACCAAGA AAGATTTAGGTAAGATTGTTGACTTGATGCTTGATGACGTTAACGCCACCTTGACCAAGAAGGGGATTACGTTAACTGTC ACCGCAGCAGCTAAAGATTGGTTGATTGAACAAGGTTATGATGAAGCAATGGGCGCACGGCCATTACGGCGTGTGATCGA ACGCAACATTCGTGATAAGGTGACTGACTTCTATTTGGATCATTTAAAGGCTAAGAAGTTGCAAGCTGATCTGGTTGATG ACGCAATTGTGATTAGCGAGAAGCAACCGACAGCTGGTAAATCAAAGAAAGTAGCCGATGGTGCGAAGTAA Protein sequence : MANFNDPFFNHDMDDVFNQMLQGMGKGESARYVVNGHEMTPDEFAQYRATGQLPKQGDEIPVETTGEQAVKKGGILEKLG RNLTQEAKDGLLDPVIGREHEIQETAEILSRRTKNNPILVGDAGVGKTAVVEGLAQAIVKGNVPESIKDKQIWSIDLSNL EAGTQYRGSFEEKIQNLIKEVKAAGNVILFFDEIHQILGAGATGGEESGGKGLADIIKPALSRGEITVIGATTQDEYRNT IMKDSALARRFNDVTINEPTAADTVKILEGIKKLYEQHHHVQLPENVLKAAVDYSIQYIPQRSLPDKAIDLIDMTAAHLA SKHPIVDKVELEKQIKDLNAQKDAAAKAEDFEKAANLKKTIADKQHQLDGTKDEKPVVATPNDVAAAVERLTGVPVSKLG ASDIERLKGIGKRLKGKVIGQDEAVEMVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRL DMSEYSDRTAVSKLIGTSAGYVGYNDNNNTLTEQVRRNPYSIVLLDEIEKADPQVLTLLLQVLDDGRLTDGQGNVVDFKN TVIIATSNAGFGNETLTGKKEQDEDLMKRLAPYFRPEFLNRFNGIVEFSHLTKKDLGKIVDLMLDDVNATLTKKGITLTV TAAAKDWLIEQGYDEAMGARPLRRVIERNIRDKVTDFYLDHLKAKKLQADLVDDAIVISEKQPTAGKSKKVADGAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-114 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LCAZH_1988 | YP_003789049.1 | Clp protease/DnaK/DnaJ chaperone ATP-binding subunit | VFG0080 | Protein | 8e-126 | 49 |
| LCAZH_1988 | YP_003789049.1 | Clp protease/DnaK/DnaJ chaperone ATP-binding subunit | VFG0079 | Protein | 3e-115 | 46 |
