Gene Information

Name : LCAZH_1960 (LCAZH_1960)
Accession : YP_003789021.1
Strain : Lactobacillus casei Zhang
Genome accession: NC_014334
Putative virulence/resistance : Resistance
Product : polar amino acid ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 1917715 - 1918452 bp
Length : 738 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAATGATCGAATTTCATGACGTTAATAAGTACTTTGGTAAATTTCATGCTTTAAAGAATATCAATCTCACAGTTGA
TCGTGGTGAAGTTGTCACCATCATTGGGCCGTCTGGATCCGGCAAAAGTACCTTACTTCGTTGCATCAATGGGCTGGAGC
GGATCACATCTGGACAACTAATCGTGAATGATTTTGACCTAGCTGACAAGAAAACCGATATGAACCGCATTCGCAAAAAT
GTGGGTATGGTTTTCCAGCATTTTAACCTGTATGCCAATAAGAATGTGTTGCAAAACGTGACCTTAGGACCAGATTTGGT
TCTGAAACGAAATAAGCAAGAAGTTGAGCAGGAAGCGCATGATCTGTTGAAAATGGTTGGCCTCGAAAATAAAGCCGACA
GTTTCCCAGGTGAGCTTTCTGGTGGACAGCAACAGCGGGTAGCTATCGCCCGCAGTTTGGCGATGAAACCTAAAGCTATT
TTGTTTGACGAACCGACCAGTGCACTGGATCCGGAAATGATCGGCGATGTGCTGGATGTGATGCAGAAAATTGCCGAACA
GGGCATGACCATGGTGGTTGTCACTCACGAAATGGGCTTTGCTCGTCACGTCGGTAATCGGATTGTCTTTATGGATGACG
GCCAGATTCTGGTTGACTCGGCCAATGTCGATCAATTCTTTGATGATCCTCAAGAACCACGGGCCAAGGAATTTCTCAGT
AAAATTATTAACCACTAA

Protein sequence : 
MSMIEFHDVNKYFGKFHALKNINLTVDRGEVVTIIGPSGSGKSTLLRCINGLERITSGQLIVNDFDLADKKTDMNRIRKN
VGMVFQHFNLYANKNVLQNVTLGPDLVLKRNKQEVEQEAHDLLKMVGLENKADSFPGELSGGQQQRVAIARSLAMKPKAI
LFDEPTSALDPEMIGDVLDVMQKIAEQGMTMVVVTHEMGFARHVGNRIVFMDDGQILVDSANVDQFFDDPQEPRAKEFLS
KIINH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 5e-45 43
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-45 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCAZH_1960 YP_003789021.1 polar amino acid ABC transporter ATPase NC_012469.1.7686878. Protein 7e-26 41