Gene Information

Name : LCAZH_1896 (LCAZH_1896)
Accession : YP_003788962.1
Strain : Lactobacillus casei Zhang
Genome accession: NC_014334
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1847539 - 1847742 bp
Length : 204 bp
Strand : +
Note : -

DNA sequence :
ATGAACCGCGTACGCGACTATCGGCGGGCAAAGAAAATGTCACAACTGGCTTTGGCGGAAAAAATCGGCGTTGCTCGACA
AACCATTAATCTCATTGAAAACGGCAAATACAATCCTTCTTTGGCTCTTTGTCTCAAACTGGCGTGGACGCTAAAAACCG
ATTTGAACAGCTTATTTTGGAGGAAAGAAAATGAATCGAATTGA

Protein sequence :
MNRVRDYRRAKKMSQLALAEKIGVARQTINLIENGKYNPSLALCLKLAWTLKTDLNSLFWRKENESN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-07 55
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-07 55
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-10 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCAZH_1896 YP_003788962.1 transcriptional regulator VFG2168 Protein 2e-07 55
LCAZH_1896 YP_003788962.1 transcriptional regulator VFG2175 Protein 2e-07 55